ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4734_5

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(4061..4441)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator Tax=Thermotoga sp. EMP RepID=J9H297_9THEM similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 120.0
  • Bit_score: 87
  • Evalue 5.80e-15
Marine sediment metagenome DNA, contig: S03H2_S05434 {ECO:0000313|EMBL:GAH50250.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 121.0
  • Bit_score: 94
  • Evalue 8.70e-17
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 120.0
  • Bit_score: 87
  • Evalue 1.60e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 381
ATGTATATTACAATCGATGAAAGGGACCGAAGGCCGCTTTACCAGCAGGTTGTGGATGAGATAAAGGCGCTTATTGCCGGAGGCGAATTACCGGAGGGCTCGTCTCTCCCTCCGGTGAGGCAAGTCGCTGCTGACCTGGGTGTTAATCTCAACACGATCGCCCATGCTTACCGGCAGCTTCAGAAACAGGGACTGGTTAAGATTAGGCACGGCGCGGGCGCAGTTGTCACGTCGCGGCTTCTAAACGAGGCAGCCGAAGAGCAACTCCGCAGTCAACTGGCAACTGTTCTGACGCATCTGGCTCTGGCTGGTTTGACCCCAACTGAAGTGAGGTCGCTGCTAGAGGTGGAGTTGGCCCGACTTTATAAGGACAAAGGCTAG
PROTEIN sequence
Length: 127
MYITIDERDRRPLYQQVVDEIKALIAGGELPEGSSLPPVRQVAADLGVNLNTIAHAYRQLQKQGLVKIRHGAGAVVTSRLLNEAAEEQLRSQLATVLTHLALAGLTPTEVRSLLEVELARLYKDKG*