ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4734

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4734_1
unknown

Not on your lists

2..145
DNA (144bp) protein (48aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4734_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

224..1840
DNA (1617bp) protein (539aa)
von Willebrand factor type A domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF00_CHLTF
von Willebrand factor type A domain-containing protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AEP12533.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_4734_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1821..2837
DNA (1017bp) protein (339aa)
von Willebrand factor type A domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF00_CHLTF
von Willebrand factor type A domain-containing protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AEP12533.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_4734_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2958..4034
DNA (1077bp) protein (359aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI02_CHLTF
FecR family protein {ECO:0000313|EMBL:CDM66893.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4734_5

Not on your lists

comp(4061..4441)
DNA (381bp) protein (127aa)
GntR family transcriptional regulator Tax=Thermotoga sp. EMP RepID=J9H297_9THEM
Marine sediment metagenome DNA, contig: S03H2_S05434 {ECO:0000313|EMBL:GAH50250.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GntR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_4734_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4509..5993)
DNA (1485bp) protein (495aa)
Putative oxidoreductase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Q4_CALAS
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAM00942.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_65_b1_redo_sep16_scaffold_4734_7

Not on your lists

comp(5998..6918)
DNA (921bp) protein (307aa)
Putative uncharacterized protein Tax=uncultured bacterium 164 RepID=E3T6Z1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36085.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 164.;"
CAAX amino terminal protease
PLM4_65_b1_redo_sep16_scaffold_4734_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7006..7575)
DNA (570bp) protein (190aa)
NTP pyrophosphohydrolase {ECO:0000313|EMBL:CDM66458.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CDM66458.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000365D4FE
PLM4_65_b1_redo_sep16_scaffold_4734_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7586..8914)
DNA (1329bp) protein (443aa)
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CDM66459.1}; EC=6.3.2.12 {ECO:0000313|EMBL:CDM66459.1};; EC=6.3.2.17 {ECO:0000313|EMBL:CDM66459.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE62_CHLTF
PLM4_65_b1_redo_sep16_scaffold_4734_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9165..10073)
DNA (909bp) protein (303aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003675258
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
PLM4_65_b1_redo_sep16_scaffold_4734_11
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(10222..10800)
DNA (579bp) protein (193aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4D1_9CHLR
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_b1_redo_sep16_scaffold_4734_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10985..11980)
DNA (996bp) protein (332aa)
Exopolyphosphatase-related protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFH6_CHLTF
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:CDM66461.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
exopolyphosphatase-like protein
PLM4_65_b1_redo_sep16_scaffold_4734_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12058..12417)
DNA (360bp) protein (120aa)
Ribosome-binding factor A Tax=Desulfitobacterium hafniense RepID=RBFA_DESHD
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rbfA; ribosome-binding factor A
PLM4_65_b1_redo_sep16_scaffold_4734_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12515..14455)
DNA (1941bp) protein (647aa)
Translation initiation factor IF-2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFH8_CHLTF
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
translation initiation factor IF-2
Displaying 14 items

View Taxonomy