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PLM4_65_b1_redo_sep16_scaffold_6462_8

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 11550..12305

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 238.0
  • Bit_score: 298
  • Evalue 6.10e-78
tRNA pseudouridine synthase B Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAF0_GEOLS similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 248.0
  • Bit_score: 225
  • Evalue 3.60e-56
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 248.0
  • Bit_score: 225
  • Evalue 1.00e-56

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGGATGGTGTGCTGATTATCGACAAGCCGCCGGGGCTGACTTCACACGACGTTGTAGCGCAGGTGCGGCACATTCTTCAGGAGCGAAGAGTGGGCCACACGGGAACGCTGGATCCCTTTGCCACCGGCGTGCTGGTGACTCTGCTTGGTCGAGCAACGCGCCTGGCCCAGTTTCTCAGTGGACTCGAAAAAGAGTATGAGGCGGTGATTCGCCTGGGTTACGCCACCGATACGGGCGACATCACGGGAAAGCCCGTTCGCAAAAGCGAGGAGGATTCGGTGCTCAAAGGCGAATCAACCGGCAATCGTGGACAGAGATGGACCAAAGAGCAAATTGAGGCCGCGCTCAAAAGTTTACGCGGCGAGATCGATCAAGTGCCGCCGATGTATTCCGCGAAAAAACAGGCCGGCCGCAAGCTTTACGAACTGGCGCGGCGGGGCGAAGAGGTGGAACGAAAGCCTGTGAGGGTTTCTATCTATGAATTTGAAGCGATCAAACTCGCTAGCAAGCCGACAGCTGAATTGCTGAAAGATAACCGCGACGGCACGTTTGACTTCGAAGTGCGCGTAGCATGTTCGGCCGGAACTTATGTTCGCACGCTGGCGGAAGATTTTGGCAAGCGCCTCGGCGTTGGCGCACATCTCGCAGAGCTGCGCCGCACACGGGTCGGAGATTTCCCGGTTGCAGATGCAAAGACGCTGGAGCAGTTGAAACTGCACTTTGCCGAGGAGTCGCTGGGCCAAATTGTGTATCCG
PROTEIN sequence
Length: 252
MDGVLIIDKPPGLTSHDVVAQVRHILQERRVGHTGTLDPFATGVLVTLLGRATRLAQFLSGLEKEYEAVIRLGYATDTGDITGKPVRKSEEDSVLKGESTGNRGQRWTKEQIEAALKSLRGEIDQVPPMYSAKKQAGRKLYELARRGEEVERKPVRVSIYEFEAIKLASKPTAELLKDNRDGTFDFEVRVACSAGTYVRTLAEDFGKRLGVGAHLAELRRTRVGDFPVADAKTLEQLKLHFAEESLGQIVYP