ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_12589_8

Organism: PLM4_65_b1_sep16_Acidobacteria_Holophagae_54_7

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(5374..6132)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized membrane protein {ECO:0000313|EMBL:CDM66035.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 247.0
  • Bit_score: 341
  • Evalue 8.20e-91
Peptidase S54, rhomboid domain bin=GWF2_Ignavibacteria_35_20 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 246.0
  • Bit_score: 318
  • Evalue 4.10e-84
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 242.0
  • Bit_score: 305
  • Evalue 1.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGGTTTTTCCGCTCTACGATGACAACAGCGATCGCACGACTACGCCGATAGTTAATTACGCTTTGATTGCCGTGAATGTCCTGGTGTTCGTCTTTCTGCAACAGCTTGGGACAAACGACAGGTTCACTTACGCCTTCTCGACGGTGCCGCAGGAGATTATCAGTGGACGCGATGTTAGAACGCCGGATCGCGTCGTGGAACATCCGGTCACCGGACAGGAGATCTTGATTCCGGGACTGCAACCAACTCCATTTTCCGTCTATCTCACTTTGATTCTTTCGATGTTTATGCATGGCGGTATTGCGCACATCGCCGGTAACATGCTTTTCCTCTGGATCTTCGGAGATAACGTCGAAGACCGCATGGGCCATCTGCGGTATCTTGTCTTCTATCTTGTATGCGGCGTCCTGGCTTCACTCGCTCATGTGTTGACGACGCTCATGTTTGCTGCCGACCCGGGCAGCTTATTGATACCGAGTCTGGGGGCTTCGGGAGCAATATCGGGCGTTCTCGGCGGCTACATCGTGCTCTATCCCCATCGTCGCGTGACGGCAATCGTGTTTCGTTTCGTCACGGACGTGCCGGCCTACGTTGCGATCGGAATCTGGTTTGCATTTCAGTTAATCAGCGGCATGGGAATTTTGGGCGGATCGCAGCAGGGTGGCGTAGCCTACGCAGCTCACATTGGCGGCTTCGTCGCCGGCGTCGTGCTCGTAAAGATATTCACCATTGGCCGCAGCGCCGGAGCGTATGCGTAA
PROTEIN sequence
Length: 253
MVFPLYDDNSDRTTTPIVNYALIAVNVLVFVFLQQLGTNDRFTYAFSTVPQEIISGRDVRTPDRVVEHPVTGQEILIPGLQPTPFSVYLTLILSMFMHGGIAHIAGNMLFLWIFGDNVEDRMGHLRYLVFYLVCGVLASLAHVLTTLMFAADPGSLLIPSLGASGAISGVLGGYIVLYPHRRVTAIVFRFVTDVPAYVAIGIWFAFQLISGMGILGGSQQGGVAYAAHIGGFVAGVVLVKIFTIGRSAGAYA*