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PLM4_65_b1_redo_sep16_scaffold_12589

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_12589_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(130..1920)
DNA (1791bp) protein (597aa)
DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains {ECO:0000313|EMBL:CDM66062.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM66062.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA polymerase Tax=uncultured Acidobacteria bacterium RepID=H5SPP7_9BACT
DNA polymerase I - 3'-5' exonuclease and polymerase domains
PLM4_65_b1_redo_sep16_scaffold_12589_2
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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comp(2084..2626)
DNA (543bp) protein (181aa)
hypothetical protein
Tax=RBG_16_Zixibacteria_48_11_curated
PLM4_65_b1_redo_sep16_scaffold_12589_3
RLO_RIF03_38_15, RIF3, Bacteria

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comp(2641..3981)
DNA (1341bp) protein (447aa)
Membrane protein, major facilitator superfamily bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
major facilitator superfamily MFS_1
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM4_65_b1_redo_sep16_scaffold_12589_4
unknown

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comp(3994..4221)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_12589_5
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4243..4539)
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YKE4_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX30577.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_12589_6
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4536..4769)
DNA (234bp) protein (78aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
addiction module protein
Tax=CG_Syntroph_02
PLM4_65_b1_redo_sep16_scaffold_12589_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4840..5262)
DNA (423bp) protein (141aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8J7_CYAP2
PLM4_65_b1_redo_sep16_scaffold_12589_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5374..6132)
DNA (759bp) protein (253aa)
Uncharacterized membrane protein {ECO:0000313|EMBL:CDM66035.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptidase S54, rhomboid domain bin=GWF2_Ignavibacteria_35_20 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rhomboid family protein
PLM4_65_b1_redo_sep16_scaffold_12589_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6199..7641)
DNA (1443bp) protein (481aa)
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:CDM66034.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Proton/sodium-glutamate symport protein bin=GWF2_Melioribacter_38_21 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
proton/sodium-glutamate symport protein
PLM4_65_b1_redo_sep16_scaffold_12589_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7690..8574)
DNA (885bp) protein (295aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE43_CHLTF
Displaying 10 items

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