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PLM4_65_b1_redo_sep16_scaffold_21083

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_21083_1
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..866
DNA (864bp) protein (288aa)
Mandelate racemase/muconate lactonizing protein Tax=Cupriavidus basilensis OR16 RepID=H1SIS7_9BURK
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EHP37577.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
mandelate racemase/muconate lactonizing enzyme family protein
PLM4_65_b1_redo_sep16_scaffold_21083_2
bacterium UASB14, Bacteria

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904..1224
DNA (321bp) protein (107aa)
Putative transcriptional regulator {ECO:0000313|EMBL:GAK54483.1}; species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_21083_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1184..1528
DNA (345bp) protein (115aa)
XRE family transcriptional regulator Tax=Sulfuricella denitrificans skB26 RepID=S6AM18_9PROT
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_b1_redo_sep16_scaffold_21083_4
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1660..3036
DNA (1377bp) protein (459aa)
glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU Tax=Caenispirillum salinarum AK4 RepID=K9HRF5_9PROT
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_21083_5
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3051..4874
DNA (1824bp) protein (608aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CCQ72755.1};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Tax=Caenispirillum salinarum AK4 RepID=K9H721_9PROT
PLM4_65_b1_redo_sep16_scaffold_21083_6
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5275..5520)
DNA (246bp) protein (82aa)
SpoVT/AbrB-like Tax=Frankia sp. (strain CcI3) RepID=Q2JCD4_FRASC
SpoVT/AbrB-like protein
Virulence-associated protein {ECO:0000313|EMBL:ETA00930.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
PLM4_65_b1_redo_sep16_scaffold_21083_7
unknown

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5776..6093
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_21083_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6191..6574
DNA (384bp) protein (128aa)
Putative membrane protein Tax=Lutibaculum baratangense AMV1 RepID=V4TL66_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:ESR26563.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
Displaying 8 items

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