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PLM4_65_b1_redo_sep16_scaffold_3305

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3305_1
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

440..1558
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI000365019B
multicopper oxidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3305_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1374..4343)
DNA (2970bp) protein (990aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TTY1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63822.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3305_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..5038)
DNA (699bp) protein (233aa)
Putative ABC transporter, ATPase component Tax=Azospirillum brasilense Sp245 RepID=G8AGZ1_AZOBR
putative ABC transporter, ATPase component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3305_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5100..5759
DNA (660bp) protein (220aa)
Lipolytic enzyme, G-D-S-L (EC:3.1.1.2)
Lipolytic enzyme, G-D-S-L Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJC9_RHOPH
Uncharacterized protein {ECO:0000313|EMBL:EWY37882.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
PLM4_65_b1_redo_sep16_scaffold_3305_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5856..6470
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJF8_POLNA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_3305_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6458..7258
DNA (801bp) protein (267aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00037DE388
metal-binding transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_3305_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7555..8823)
DNA (1269bp) protein (423aa)
N-acylglucosamine 2-epimerase Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU3_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ELZ25620.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
N-acylglucosamine 2-epimerase
PLM4_65_b1_redo_sep16_scaffold_3305_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9094..10155
DNA (1062bp) protein (354aa)
gentisate 1,2-dioxygenase Tax=Halomonas sp. KM-1 RepID=UPI00028935C4
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ETW99413.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
gentisate 1,2-dioxygenase
PLM4_65_b1_redo_sep16_scaffold_3305_9
unknown

Not on your lists

10424..10978
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3305_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11126..11761
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE05375.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3305_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11758..13692)
DNA (1935bp) protein (645aa)
ABC-type uncharacterized transport system, permease and ATPase component Tax=Microvirga sp. WSM3557 RepID=I4YMC7_9RHIZ
ATP-binding protein {ECO:0000313|EMBL:BAR57888.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
ABC transporter domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_3305_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14011..14721)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3305_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14930..15877)
DNA (948bp) protein (316aa)
dehydrogenase bin=bin7_NC10_sister species=Bacillus isronensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3305_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15874..16950)
DNA (1077bp) protein (359aa)
Oxidoreductase FAD-binding subunit Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU0_TISMK
ndoR; oxidoreductase FAD-binding subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_3305_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17004..17519
DNA (516bp) protein (172aa)
Putative transcriptional regulator, MarR family Tax=Azospirillum brasilense Sp245 RepID=G8AGC2_AZOBR
putative transcriptional regulator, MarR family
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:CCC96657.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_3305_16
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17516..19084
DNA (1569bp) protein (523aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00036645AA
Uncharacterized protein {ECO:0000313|EMBL:EWH02525.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
AMP-dependent synthetase and ligase
Displaying 16 items

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