name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_b1_redo_sep16_scaffold_3613_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..242
|
Threonine dehydratase {ECO:0000313|EMBL:EWY38906.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EWY38906.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Threonine dehydratase Tax=Oceanibaculum indicum P24 RepID=K2JJ66_9PROT
threonine dehydratase
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
332..778
|
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI0003606C60
Uncharacterized protein {ECO:0000313|EMBL:EKE76422.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_3
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(834..1538)
|
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Ribosomal RNA large subunit methyltransferase E Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQW0_PHAMO
23S rRNA methylase
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1546..2730)
|
Ppx/GppA phosphatase bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Ppx/GppA phosphatase
Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_trna_1
unknown
|
Not on your lists |
2970..3040
|
transferRNA Gln
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3711..3899
|
hypothetical protein Tax=Hoeflea sp. 108 RepID=UPI00036C0538
pilA; type IV pilus protein
Component of type IV pilus {ECO:0000313|EMBL:ACM25069.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_6
unknown
|
Not on your lists |
3951..4250
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_7
unknown
|
Not on your lists |
4284..4562
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_8
unknown
|
Not on your lists |
comp(4540..4674)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_9
unknown
|
Not on your lists |
comp(4677..4916)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_10
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5470..5700
|
Pilus subunit protein Tax=Rhizobium sp. CCGE 510 RepID=J5MK91_9RHIZ
Pilus subunit protein {ECO:0000313|EMBL:EJT03165.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
Flp/Fap pilin component protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_11
unknown
|
Not on your lists |
5810..5980
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_12
unknown
|
Not on your lists |
comp(6302..6871)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7479..7649)
|
PilA pilus assembly protein Tax=Rhizobium leguminosarum RepID=UPI00035D864D
Flp/Fap pilin component
Flp/Fap pilin component {ECO:0000313|EMBL:ADJ22140.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_14
unknown
|
Not on your lists |
comp(7882..8226)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_15
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8475..9134
|
Uncharacterized protein Tax=Rhodospirillum rubrum RepID=Q2RT78_RHORT
Membrane protein {ECO:0000313|EMBL:EWH07749.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas lipolytica SCSIO 04301.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9164..10849)
|
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00126}; EC=6.1.1.18 {ECO:0000255|HAMAP-Rule:MF_00126};; Glutaminyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00126}; Short=GlnRS {ECO:0000255|HAMAP-Rule:MF_00126};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Glutamine--tRNA ligase Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=SYQ_NITWN
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_17
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10998..12071
|
Rhodanese domain protein Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T3Z9_BURSG
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADN56047.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_18
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12068..12568
|
Uncharacterized protein Tax=Sphingobium sp. SYK-6 RepID=G2IU86_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK68611.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12572..13027
|
hypothetical protein Tax=Aureimonas ureilytica RepID=UPI00037CF617
Uncharacterized protein {ECO:0000313|EMBL:EGP54064.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_20
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13161..14201
|
ATP-dependent transcriptional regulator Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ERH9_CUPNN
ATP-dependent transcriptional regulator
ATP-dependent transcriptional regulator {ECO:0000313|EMBL:AEI76616.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_21
unknown
|
Not on your lists |
comp(14164..14562)
|
Serine/threonine-protein kinase-like domain protein Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JW59_HYPDA
Serine/threonine protein kinase {ECO:0000313|EMBL:CPR16317.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
serine/threonine-protein kinase-like domain-containing protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_trna_2
unknown
|
Not on your lists |
14663..14734
|
transferRNA Lys
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_22
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14862..15293
|
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TQC3_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54961.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15452..15772
|
UPI0003CF7B23 related cluster Tax=unknown RepID=UPI0003CF7B23
Uncharacterized protein {ECO:0000313|EMBL:GAN77821.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_3613_24
unknown
|
Not on your lists |
15814..16035
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_25
unknown
|
Not on your lists |
comp(15924..16139)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_26
unknown
|
Not on your lists |
16457..16669
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_3613_27
unknown
|
Not on your lists |
16697..16918
|
This feature has no annotations |