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PLM4_65_b1_redo_sep16_scaffold_18257

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18257_1

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comp(137..910)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Pseudomonas sp. GM18 RepID=J2NAH4_9PSED
Marine sediment metagenome DNA, contig: S03H2_S19437 {ECO:0000313|EMBL:GAH85390.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_18257_trna_1
unknown

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comp(1211..1282)
DNA (72bp)
transferRNA Gly
PLM4_65_b1_redo_sep16_scaffold_18257_2
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1408..1929
DNA (522bp) protein (174aa)
DNA-binding protein Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YMT3_9RHIZ
DNA-binding protein {ECO:0000313|EMBL:ERI12111.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_18257_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2039..2989
DNA (951bp) protein (317aa)
Thioredoxin, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUQ4_RHOCS
Thioredoxin {ECO:0000313|EMBL:EWY42409.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
thioredoxin
PLM4_65_b1_redo_sep16_scaffold_18257_4
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3024..3683
DNA (660bp) protein (220aa)
Peptidase S16 lon protein Tax=Azospirillum sp. (strain B510) RepID=D3NX17_AZOS1
Peptidase S16 {ECO:0000313|EMBL:KJV10914.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
peptidase S16 lon protein
PLM4_65_b1_redo_sep16_scaffold_18257_5
bacterium YEK0313, Bacteria

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3694..3972
DNA (279bp) protein (93aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI00037CE759
UPF0434 protein BN1110_01225 {ECO:0000256|HAMAP-Rule:MF_01187}; species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_18257_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4116..4493
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9E5_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJB95719.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_18257_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4526..4792
DNA (267bp) protein (89aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00035C7C34
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_18257_8
bacterium YEK0313, Bacteria

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4993..6012
DNA (1020bp) protein (340aa)
amino acid ABC transporter substrate-binding protein Tax=Kaistia granuli RepID=UPI00036A8F50
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:CEJ12148.1}; Flags: Precursor;; species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_18257_9
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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6015..7121
DNA (1107bp) protein (369aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family Tax=Thioflavicoccus mobilis 8321 RepID=L0GY68_9GAMM
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJZ10545.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
amine acid ABC transporter permease
Displaying 10 items

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