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PLM4_65_b1_redo_sep16_scaffold_5330

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5330_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5330_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..1685)
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003638D47
Conserved protein of unknown function. Containing vWFA (von Willebrand factor, type A) domain
Uncharacterized protein {ECO:0000313|EMBL:CCQ73542.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_3
unknown

Not on your lists

comp(1951..2148)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5330_4
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2349..2984)
DNA (636bp) protein (212aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003638D47
Conserved protein of unknown function. Containing vWFA (von Willebrand factor, type A) domain
Uncharacterized protein {ECO:0000313|EMBL:CCQ73542.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_5
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3085..3771)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003638D47
Conserved protein of unknown function. Containing vWFA (von Willebrand factor, type A) domain
Uncharacterized protein {ECO:0000313|EMBL:CCQ73542.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4069..4239
DNA (171bp) protein (57aa)
Uncharacterized protein Tax=Oceanicaulis sp. HTCC2633 RepID=A3UFJ7_9RHOB
component of type 4 pilus pilin subunit protein
Tax=BJP_IG2102_Porphyrobacter_62_18
PLM4_65_b1_redo_sep16_scaffold_5330_7
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4494..4664
DNA (171bp) protein (57aa)
Pilus subunit protein Tax=Rhizobium sp. CCGE 510 RepID=J5MK91_9RHIZ
Pilus subunit protein {ECO:0000313|EMBL:EJT03165.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
Flp/Fap pilin component protein
PLM4_65_b1_redo_sep16_scaffold_5330_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5560)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Mesorhizobium sp. STM 4661 RepID=M5F9L9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV12848.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Transmembrane protein 195
PLM4_65_b1_redo_sep16_scaffold_5330_9
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5736..6362
DNA (627bp) protein (209aa)
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W2Q0_RHILT
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_5330_10
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6595..7173
DNA (579bp) protein (193aa)
Type IV prepilin peptidase TadV/CpaA Tax=Caenispirillum salinarum AK4 RepID=K9HDW9_9PROT
Putative pilus assembly protein CpaA
Putative pilus assembly protein CpaA {ECO:0000313|EMBL:CCQ73548.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_11
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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7206..8192
DNA (987bp) protein (329aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000375E77F
Pilus assembly protein CpaB {ECO:0000313|EMBL:KIY13552.1}; species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
pilus assembly protein CpaB
PLM4_65_b1_redo_sep16_scaffold_5330_12
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8213..9697
DNA (1485bp) protein (495aa)
Putative Pilus assembly protein cpaC putative signal peptide Tax=Azospirillum brasilense Sp245 RepID=G8B060_AZOBR
Putative CpaC
Putative CpaC {ECO:0000313|EMBL:CCQ73550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_13
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..10464
DNA (729bp) protein (243aa)
Putative Pilus assembly protein CpaD Tax=Azospirillum brasilense Sp245 RepID=G8B061_AZOBR
Exported protein of unknown function CpaD-C
Uncharacterized protein {ECO:0000313|EMBL:CCQ73551.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_14
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10461..12527
DNA (2067bp) protein (689aa)
Flp pilus assembly protein ATPase CpaE Tax=Sphingobium baderi LL03 RepID=T0HPP6_9SPHN
Flp pilus assembly protein ATPase CpaE {ECO:0000313|EMBL:GAO39655.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
pilus assembly protein CpaE
PLM4_65_b1_redo_sep16_scaffold_5330_15
unknown

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comp(12688..12996)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_5330_16
GWB2_WOR_2_45_9_curated, WOR-2, Bacteria

Not on your lists

comp(13159..13539)
DNA (381bp) protein (127aa)
hypothetical protein Tax=Bordetella pertussis RepID=UPI000378BA5A
Tax=GWB2_WOR_2_45_9_curated
PLM4_65_b1_redo_sep16_scaffold_5330_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13602..14105
DNA (504bp) protein (168aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI00036055FA
pilus assembly protein CpaF cpaF
Pilus assembly protein CpaF cpaF {ECO:0000313|EMBL:ACG79409.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_65_b1_redo_sep16_scaffold_5330_18
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14118..15122
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00037B1E5D
Conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73554.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM4_65_b1_redo_sep16_scaffold_5330_19
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15133..16101
DNA (969bp) protein (323aa)
Type II/IV secretion system protein TadC, associated with Flp pilus assembly Tax=alpha proteobacterium JLT2015 RepID=M2T9H6_9PROT
Type II/IV secretion system protein TadC, associated with Flp pilus assembly {ECO:0000313|EMBL:EMD83224.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_5330_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16246..17349
DNA (1104bp) protein (368aa)
hypothetical protein Tax=Burkholderia thailandensis RepID=UPI00016AD99B
Uncharacterized protein {ECO:0000313|EMBL:KGM31978.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
tetratricopeptide repeat family protein
PLM4_65_b1_redo_sep16_scaffold_5330_21
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17594..18724
DNA (1131bp) protein (377aa)
Diaminopimelate decarboxylase Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W7I3_MAGSA
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000313|EMBL:BAE50192.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM4_65_b1_redo_sep16_scaffold_5330_22
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18808..19149
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRH0_PARL1
Conserved protein of unknown function
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_5330_23
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19142..20062)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TTM1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP64152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integral membrane protein
PLM4_65_b1_redo_sep16_scaffold_5330_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20237..21322
DNA (1086bp) protein (362aa)
4-hydroxyphenylpyruvate dioxygenase Tax=alpha proteobacterium BAL199 RepID=A8TTE8_9PROT
vllY; 4-hydroxyphenylpyruvate dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_b1_redo_sep16_scaffold_5330_25
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21946..22938
DNA (993bp) protein (331aa)
Fumarylacetoacetate hydrolase family protein Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JXU3_9GAMM
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KJS35752.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
2-keto-4-pentenoate hydratase
PLM4_65_b1_redo_sep16_scaffold_5330_26
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23114..23977)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense RepID=V6F644_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 26 items

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