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PLM4_65_b1_redo_sep16_scaffold_1613

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1613_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..239
DNA (237bp) protein (79aa)
Putative carboxylesterase Tax=Azospirillum brasilense Sp245 RepID=G8ARC4_AZOBR
putative carboxylesterase
Putative carboxylesterase {ECO:0000313|EMBL:CCC99985.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_1613_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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421..2679
DNA (2259bp) protein (753aa)
Serine/threonine protein kinase (Modular protein) Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T482_META2
serine/threonine protein kinase
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_65_b1_redo_sep16_scaffold_1613_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2697..4364
DNA (1668bp) protein (556aa)
Serine/threonine protein kinase Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8Y6_MAGSM
serine/threonine protein kinase
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_65_b1_redo_sep16_scaffold_1613_4
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4407..5006)
DNA (600bp) protein (200aa)
NUDIX hydrolase Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2KY06_9PROT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AJD51099.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
PLM4_65_b1_redo_sep16_scaffold_1613_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5030..5347
DNA (318bp) protein (106aa)
DNA polymerase III subunit alpha Tax=alpha proteobacterium BAL199 RepID=A8TUN0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB90715.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
alpha/beta superfamily hydrolase
PLM4_65_b1_redo_sep16_scaffold_1613_6
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5349..5897)
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRS7_CYAP4
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACL45944.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM4_65_b1_redo_sep16_scaffold_1613_7
unknown

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comp(5920..6663)
DNA (744bp) protein (248aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6697..7734)
DNA (1038bp) protein (346aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037690BF
PLM4_65_b1_redo_sep16_scaffold_1613_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7925..8170
DNA (246bp) protein (82aa)
Helix-turn-helix domain-containing protein Tax=Afipia sp. 1NLS2 RepID=D6V090_9BRAD
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EFI53120.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
XRE family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_1613_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8177..10186
DNA (2010bp) protein (670aa)
hyfB; hydrogenase 4 subunit B (EC:1.-.-.-)
oxidoreductase Tax=Rhizobium leguminosarum RepID=UPI00036B3192
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_1613_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10177..11133
DNA (957bp) protein (319aa)
formate hydrogenlyase Tax=Elioraea tepidiphila RepID=UPI000376182B
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:ACB96083.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
PLM4_65_b1_redo_sep16_scaffold_1613_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11133..11795
DNA (663bp) protein (221aa)
Hydrogenase-4 component E Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH87_9BRAD
Hydrogenase-4 component E {ECO:0000313|EMBL:ERF83085.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1613_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11792..13240
DNA (1449bp) protein (483aa)
UPI0003CF8719 related cluster Tax=unknown RepID=UPI0003CF8719
Oxidoreductase {ECO:0000313|EMBL:ESW90118.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
NADH/Ubiquinone/plastoquinone (complex I)
PLM4_65_b1_redo_sep16_scaffold_1613_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13245..14765
DNA (1521bp) protein (507aa)
UPI0003CEE45A related cluster Tax=unknown RepID=UPI0003CEE45A
Hydrogenase expression protein HypE {ECO:0000313|EMBL:ESY77418.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NADH-ubiquinone oxidoreductase chain 49kDa
PLM4_65_b1_redo_sep16_scaffold_1613_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14889..15422
DNA (534bp) protein (178aa)
hydrogenase Tax=Elioraea tepidiphila RepID=UPI00037F0624
hycG; hydrogenase-3 subunit G
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_1613_16
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15545..16636
DNA (1092bp) protein (364aa)
2-nitropropane dioxygenase Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPS4_MEIRD
2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:AGK04857.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM4_65_b1_redo_sep16_scaffold_1613_17
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16811..20098
DNA (3288bp) protein (1096aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Beggiatoa alba B18LD RepID=I3CGY5_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_1613_18
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20159..20386
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Methylobacterium sp. GXF4 RepID=I9CR61_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD94455.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1613_19
unknown

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20383..20538
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_20
unknown

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20754..21011
DNA (258bp) protein (86aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_21
unknown

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21422..21670
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_22
unknown

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21870..22220
DNA (351bp) protein (117aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_23
unknown

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comp(22241..22930)
DNA (690bp) protein (230aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1613_24
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23094..23474)
DNA (381bp) protein (127aa)
hypothetical protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484142
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW28779.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
PLM4_65_b1_redo_sep16_scaffold_1613_25
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23710..24510)
DNA (801bp) protein (267aa)
Maleylacetoacetate isomerase bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium NOR5-3 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutathione S-transferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_1613_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24669..24869)
DNA (201bp) protein (67aa)
Putative methyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNG3_RUBGI
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAL94550.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying 26 items

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