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PLM4_65_b1_redo_sep16_scaffold_2210

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2210_1
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..668)
DNA (666bp) protein (222aa)
Histidine kinase bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
PLM4_65_b1_redo_sep16_scaffold_2210_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(768..1406)
DNA (639bp) protein (213aa)
Threonine efflux protein Tax=uncultured bacterium A1Q1_fos_36 RepID=L7VX80_9BACT
Threonine efflux protein {ECO:0000313|EMBL:KFE68945.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
threonine efflux protein
PLM4_65_b1_redo_sep16_scaffold_2210_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1430..2110
DNA (681bp) protein (227aa)
Adenylate cyclase Tax=Oceanibaculum indicum P24 RepID=K2KM30_9PROT
Adenylate cyclase {ECO:0000313|EMBL:EKE78525.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Adenylate/guanylate cyclase, family 3 putative signal peptide
PLM4_65_b1_redo_sep16_scaffold_2210_4
unknown

Not on your lists

comp(2013..2831)
DNA (819bp) protein (273aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2210_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3357..4562)
DNA (1206bp) protein (402aa)
Putative oligopeptide ABC transporter, permease protein Tax=Azospirillum brasilense Sp245 RepID=G8AGA5_AZOBR
Peptide ABC transporter permease {ECO:0000313|EMBL:KJB95834.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative oligopeptide ABC transporter, permease protein
PLM4_65_b1_redo_sep16_scaffold_2210_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4559..5554)
DNA (996bp) protein (332aa)
Oligopeptide ABC transporter, permease protein Tax=alpha proteobacterium BAL199 RepID=A8TXK4_9PROT
oligopeptide ABC transporter, permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_2210_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..7517)
DNA (1959bp) protein (653aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TXK5_9PROT
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_b1_redo_sep16_scaffold_2210_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7514..9397)
DNA (1884bp) protein (628aa)
Putative mureinpeptideoligopeptide ABC transporter ATP-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TXK7_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY40629.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_2210_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9432..9980)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TXK8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62802.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2210_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9977..10765)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WQM3_DESPC
Polysaccharide deacetylase {ECO:0000313|EMBL:EWY40630.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2210_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10762..11952)
DNA (1191bp) protein (397aa)
Glycosyltransferase 28 domain protein Tax=Azospirillum brasilense Sp245 RepID=G8AGB1_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB13057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM4_65_b1_redo_sep16_scaffold_2210_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12067..12690)
DNA (624bp) protein (208aa)
Phosphoglycerate mutase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TM70_TISMK
Phosphoglycerate mutase {ECO:0000313|EMBL:KJB95840.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
phosphoglycerate mutase
PLM4_65_b1_redo_sep16_scaffold_2210_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12687..13826)
DNA (1140bp) protein (380aa)
Glycosyltransferase Tax=uncultured bacterium RepID=M9WRP0_9BACT
Glycosyl transferase {ECO:0000313|EMBL:KJB95841.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative GT4 : distantly related to 1L-myo-inositol-1-P a-N-acetylglucoaminyltransferase
PLM4_65_b1_redo_sep16_scaffold_2210_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13832..15058)
DNA (1227bp) protein (409aa)
Glucosyltransferase Tax=alpha proteobacterium BAL199 RepID=A8TXL6_9PROT
Glucosyltransferase {ECO:0000313|EMBL:EDP62807.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
wcaL; glucosyltransferase
PLM4_65_b1_redo_sep16_scaffold_2210_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15082..16392)
DNA (1311bp) protein (437aa)
Putative glycosyltransferase Tax=Azospirillum brasilense Sp245 RepID=G8AGB4_AZOBR
Membrane protein {ECO:0000313|EMBL:EWY42369.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative glycosyltransferase
PLM4_65_b1_redo_sep16_scaffold_2210_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16665..19286
DNA (2622bp) protein (874aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AGB3_AZOBR
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCC96648.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_2210_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19293..19787
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Thalassospira profundimaris WP0211 RepID=K2LF71_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM34586.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2210_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19812..20255
DNA (444bp) protein (148aa)
Putative transcriptional regulator protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMA2_TISMK
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EWY42371.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_2210_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20259..20789
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGR9_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KGM32447.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2210_20
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20773..22416)
DNA (1644bp) protein (548aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z691_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJR65875.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2210_21
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22428..23090)
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Ribulose-phosphate 3-epimerase Tax=Oceanibaculum indicum P24 RepID=K2JLV0_9PROT
ribulose-phosphate 3-epimerase
PLM4_65_b1_redo_sep16_scaffold_2210_22
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23170..24042)
DNA (873bp) protein (291aa)
rsmB; S-adenosyl-methionine (AdoMet)-dependent RNA m5C methyltransferases (EC:2.1.1.-)
16S rRNA m(5)C 967 methyltransferase Tax=Caenispirillum salinarum AK4 RepID=K9H1T1_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Displaying 22 items

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