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PLM4_65_b1_redo_sep16_scaffold_2678

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2678_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..525
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AHE3_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC99318.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM4_65_b1_redo_sep16_scaffold_2678_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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522..1919
DNA (1398bp) protein (466aa)
Putative resolvase Tax=Azospirillum brasilense Sp245 RepID=G8AHE4_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB12682.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM4_65_b1_redo_sep16_scaffold_2678_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1995..2153
DNA (159bp) protein (53aa)
Putative resolvase Tax=Azospirillum brasilense Sp245 RepID=G8AHE4_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB12682.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM4_65_b1_redo_sep16_scaffold_2678_4
unknown

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2592..3287
DNA (696bp) protein (232aa)
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:CPR19243.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
conserved hypothetical protein with CBS domain bin=bin3_NC10 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2678_5
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

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3378..4511
DNA (1134bp) protein (378aa)
Membrane endopeptidase, M50 family {ECO:0000313|EMBL:KKR32778.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
Membrane endopeptidase, M50 family bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
M50 family membrane endopeptidase
PLM4_65_b1_redo_sep16_scaffold_2678_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4587..5483
DNA (897bp) protein (299aa)
Helix-hairpin-helix DNA-binding, class 1 Tax=Burkholderia oklahomensis RepID=UPI00016A9044
helix-hairpin-helix domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_65_b1_redo_sep16_scaffold_2678_7
unknown

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5625..6065
DNA (441bp) protein (147aa)
Inosine-5-monophosphate dehydrogenase Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SG99_9RHIZ
CBS domain-containing protein YhcV {ECO:0000313|EMBL:CPR20207.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
inosine-5-monophosphate dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_2678_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6134..6400
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Burkholderia pseudomallei MSHR346 RepID=C4I372_BURPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN87712.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 668).;"
PLM4_65_b1_redo_sep16_scaffold_2678_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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6466..7206
DNA (741bp) protein (247aa)
Beta-lactamase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYR9_RUBXD
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABG03459.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM4_65_b1_redo_sep16_scaffold_2678_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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7215..7760
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Geobacter sp. (strain M21) RepID=C6E247_GEOSM
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_65_b1_redo_sep16_scaffold_2678_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8012..8767
DNA (756bp) protein (252aa)
Phospholipid-binding domain protein, putative Tax=Geobacter metallireducens RepID=Q39YL0_GEOMG
phospholipid-binding domain-containing protein
Phospholipid-binding domain protein, putative {ECO:0000313|EMBL:ABB30664.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_b1_redo_sep16_scaffold_2678_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8793..9314
DNA (522bp) protein (174aa)
Nitroreductase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0U7_9GAMM
nitroreductase
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_65_b1_redo_sep16_scaffold_2678_13
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

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9559..10323
DNA (765bp) protein (255aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKP7_9BACT
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
PLM4_65_b1_redo_sep16_scaffold_2678_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10320..11123
DNA (804bp) protein (268aa)
ABC-2 type transporter Tax=Pedosphaera parvula Ellin514 RepID=B9XKP6_9BACT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter
PLM4_65_b1_redo_sep16_scaffold_2678_15
unknown

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comp(11254..11481)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2678_16
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11625..12086)
DNA (462bp) protein (154aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI0003671151
Kinase inhibitor YbhB
Putative Kinase inhibitor YbhB {ECO:0000313|EMBL:ADZ69828.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM4_65_b1_redo_sep16_scaffold_2678_17
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12083..14755)
DNA (2673bp) protein (891aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI0003633874
AMP-dependent synthetase and ligase:Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EAT05844.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
AMP-dependent synthetase and ligase
PLM4_65_b1_redo_sep16_scaffold_2678_18
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14852..15292)
DNA (441bp) protein (147aa)
Putative signal transduction protein with CBS domain protein Tax=Salipiger mucosus DSM 16094 RepID=S9QVW0_9RHOB
Putative signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EPX83687.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2678_19
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15423..16460)
DNA (1038bp) protein (346aa)
Poly(3-hydroxyalkanoate) synthetase-like protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAZ2_STAND
poly(3-hydroxyalkanoate) synthetase-like protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
PLM4_65_b1_redo_sep16_scaffold_2678_20
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16497..17348)
DNA (852bp) protein (284aa)
cheR; chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase CheR protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TW37_9DELT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_2678_21
unknown

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comp(17456..18013)
DNA (558bp) protein (186aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2678_22
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18082..18390)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2W6_NITHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_2678_23
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18512..18952)
DNA (441bp) protein (147aa)
Inosine-5-monophosphate dehydrogenase Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SG99_9RHIZ
inosine-5-monophosphate dehydrogenase
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:AHB48979.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 23 items

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