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PLM4_65_b1_redo_sep16_scaffold_2944

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2944_1
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1066
DNA (1065bp) protein (355aa)
Putative diheme cytochrome c-553 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DQR0_THIND
cycG_[H]; Putative diheme cytochrome c-553
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM4_65_b1_redo_sep16_scaffold_2944_2
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1110..2435
DNA (1326bp) protein (442aa)
ATPase Tax=Herbaspirillum frisingense GSF30 RepID=R0G3Q0_9BURK
ATPase {ECO:0000313|EMBL:EOA03512.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
ATPase
PLM4_65_b1_redo_sep16_scaffold_2944_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2580..3749
DNA (1170bp) protein (390aa)
Sel1 repeat family bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Sel1 repeat-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_2944_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3880..4878
DNA (999bp) protein (333aa)
catechol 2,3-dioxygenase (EC:1.13.11.2)
Catechol 2,3-dioxygenase {ECO:0000313|EMBL:ABG03177.1}; EC=1.13.11.2 {ECO:0000313|EMBL:ABG03177.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Catechol 2,3-dioxygenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZK1_RUBXD
PLM4_65_b1_redo_sep16_scaffold_2944_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4881..5468)
DNA (588bp) protein (196aa)
Putative glutathione S-transferase kappa Tax=Variovorax paradoxus B4 RepID=T1X6N6_VARPD
putative glutathione S-transferase kappa
Putative glutathione S-transferase kappa {ECO:0000313|EMBL:AGU47999.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
PLM4_65_b1_redo_sep16_scaffold_2944_6
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5519..6457
DNA (939bp) protein (313aa)
Kinase, PfkB family {ECO:0000313|EMBL:EFH10792.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EFH10792.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Kinase, PfkB family Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPJ7_9PROT
ribokinase domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2944_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6460..7188)
DNA (729bp) protein (243aa)
Short-chain dehydrogenase/reductase SDR Tax=Cupriavidus sp. HMR-1 RepID=L2EJU9_9BURK
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM4_65_b1_redo_sep16_scaffold_2944_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7469..9022
DNA (1554bp) protein (518aa)
Glucans biosynthesis protein G Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094V7_STIAD
Glucans biosynthesis protein G {ECO:0000256|HAMAP-Rule:MF_01069}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
mdoG; periplasmic glucans biosynthesis protein mdog
PLM4_65_b1_redo_sep16_scaffold_2944_9
unknown

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9010..9474
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2944_10
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9483..11510
DNA (2028bp) protein (676aa)
Periplasmic glucan biosynthesis protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FDU8_STIAD
mdoH; periplasmic glucan biosynthesis protein
Periplasmic glucan biosynthesis protein {ECO:0000313|EMBL:ADO71363.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_2944_trna_1
unknown

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comp(11567..11637)
DNA (71bp)
transferRNA Cys
PLM4_65_b1_redo_sep16_scaffold_2944_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11878..12534
DNA (657bp) protein (219aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase Tax=Fodinicurvata sediminis RepID=UPI0003B3D16F
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:KJB93610.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PLM4_65_b1_redo_sep16_scaffold_2944_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12611..14047
DNA (1437bp) protein (479aa)
Outer membrane protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W526_MAGSA
Outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:BAE51049.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
PLM4_65_b1_redo_sep16_scaffold_2944_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14190..15461
DNA (1272bp) protein (424aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137D1_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF01360.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
PLM4_65_b1_redo_sep16_scaffold_2944_14
unknown

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comp(15480..15620)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2944_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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15700..18411
DNA (2712bp) protein (904aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Valine--tRNA ligase Tax=alpha proteobacterium BAL199 RepID=A8TKR8_9PROT
valS; Valyl-tRNA synthetase
PLM4_65_b1_redo_sep16_scaffold_2944_16
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18430..19332)
DNA (903bp) protein (301aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Signal transduction histidine kinase Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9V4_MAGSA
Signal transduction histidine kinase
Displaying 17 items

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