ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_7999

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7999_1
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(3..872)
DNA (870bp) protein (290aa)
Diacylglycerol kinase catalytic region Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XXL5_STAC7
diacylglycerol kinase catalytic region
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:AFZ37340.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
PLM4_65_b1_redo_sep16_scaffold_7999_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1057..3261)
DNA (2205bp) protein (735aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Polyribonucleotide nucleotidyltransferase Tax=Azospirillum brasilense Sp245 RepID=G8AFH0_AZOBR
pnp; polynucleotide phosphorylase
PLM4_65_b1_redo_sep16_scaffold_7999_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3444..3713)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Novispirillum itersonii RepID=UPI0003728EB4
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
PLM4_65_b1_redo_sep16_scaffold_7999_4
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3733..4662)
DNA (930bp) protein (310aa)
tRNA pseudouridine synthase B Tax=Oceanibaculum indicum P24 RepID=K2JUY0_9PROT
pseudouridine synthase
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_7999_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4682..5131)
DNA (450bp) protein (150aa)
Ribosome-binding factor A Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVF9_RHOCS
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM4_65_b1_redo_sep16_scaffold_7999_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5201..7894)
DNA (2694bp) protein (898aa)
Translation initiation factor IF-2 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F673_9PROT
infB; Translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM4_65_b1_redo_sep16_scaffold_7999_7
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7904..8569)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Meganema perideroedes RepID=UPI000376E1F4
50S ribosomal protein L7 {ECO:0000313|EMBL:KGJ07408.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
Ylxr-like protein
PLM4_65_b1_redo_sep16_scaffold_7999_8
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8580..10304)
DNA (1725bp) protein (575aa)
Transcription elongation protein nusA (N utilization substance protein A) (L factor) Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU74_PHAMO
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
nusA; transcription termination factor
PLM4_65_b1_redo_sep16_scaffold_7999_9
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10309..10962)
DNA (654bp) protein (218aa)
Ribosome maturation factor RimP Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU75_PHAMO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
Displaying 9 items

View Taxonomy