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PLM4_65_b1_redo_sep16_scaffold_71237

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_71237_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..740
DNA (738bp) protein (246aa)
Alpha-isopropylmalate/homocitrate synthase family transferase Tax=Oceanibaculum indicum P24 RepID=K2JX20_9PROT
Alpha-isopropylmalate/homocitrate synthase family transferase {ECO:0000313|EMBL:EKE74849.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative alpha-isopropylmalate/homocitrate synthase family transferase
PLM4_65_b1_redo_sep16_scaffold_71237_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(746..1054)
DNA (309bp) protein (103aa)
Plasmid maintenance system antidote protein, XRE family Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IE8_RHOP5
XRE family plasmid maintenance system antidote protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_71237_3
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(1063..1344)
DNA (282bp) protein (94aa)
Plasmid maintenance system killer protein Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z201_9BRAD
plasmid maintenance system killer protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_b1_redo_sep16_scaffold_71237_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1476..2309
DNA (834bp) protein (278aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
RNA methyltransferase, TrmH family, group 1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWA7_PARL1
RNA methyltransferase
PLM4_65_b1_redo_sep16_scaffold_71237_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2336..2851)
DNA (516bp) protein (172aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_71237_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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3152..3769
DNA (618bp) protein (206aa)
30S ribosomal protein S4 Tax=alpha proteobacterium BAL199 RepID=A8TMZ1_9PROT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
rpsD; 30S ribosomal protein S4
PLM4_65_b1_redo_sep16_scaffold_71237_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3846..4202)
DNA (357bp) protein (119aa)
Transcriptional regulator, HxlR family Tax=root RepID=B5ELB5_ACIF5
transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACH82631.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
PLM4_65_b1_redo_sep16_scaffold_71237_8
Salinivibrio sp. KP-1, Salinivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4352..5095)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Vibrio vulnificus RepID=UPI000301277A
Uncharacterized protein {ECO:0000313|EMBL:KKA45928.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Salinivibrio.;" source="Salinivibrio sp. KP-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_71237_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5143..5475)
DNA (333bp) protein (111aa)
glutaredoxin Tax=Fodinicurvata sediminis RepID=UPI0003B32033
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
glutaredoxin-like protein
PLM4_65_b1_redo_sep16_scaffold_71237_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5537..5776)
DNA (240bp) protein (80aa)
BolA-like protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I8B2_AZOC5
Alcohol dehydrogenase {ECO:0000313|EMBL:KFC74054.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
bolA; BolA-like protein
Displaying 10 items

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