ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_16833

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_16833_1
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..709
DNA (708bp) protein (236aa)
Adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase bin=GWB1_Deltaproteobacteria_rel_55_8 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=CG_Delta_07
PLM4_65_b1_redo_sep16_scaffold_16833_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(847..1314)
DNA (468bp) protein (156aa)
Thioesterase superfamily protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7M8_ANAD2
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACL67208.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM4_65_b1_redo_sep16_scaffold_16833_3

Not on your lists

comp(1336..3186)
DNA (1851bp) protein (617aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000360861D
HEAT repeat-containing protein
Marine sediment metagenome DNA, contig: S01H1_L06444 {ECO:0000313|EMBL:GAF76288.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_16833_trna_1
unknown

Not on your lists

3277..3349
DNA (73bp)
transferRNA Lys
PLM4_65_b1_redo_sep16_scaffold_16833_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

3371..3895
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANP5_IGNAJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_16833_5
RLO_PLX_64_10, Bacteria

Not on your lists

3970..4725
DNA (756bp) protein (252aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_16833_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4946..5269
DNA (324bp) protein (108aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_16833_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5329..5664
DNA (336bp) protein (112aa)
4-carboxymuconolactone decarboxylase (EC:4.1.1.44)
4-carboxymuconolactone decarboxylase Tax=Candidatus Nitrospira defluvii RepID=D8P9N4_9BACT
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_16833_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5668..6720
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7N3_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_16833_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6736..7398
DNA (663bp) protein (221aa)
Gll2498 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHN7_GLOVI
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 10 items

View Taxonomy