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PLM4_65_b1_redo_sep16_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_209_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1..1062
DNA (1062bp) protein (354aa)
id=4542770 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_209_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1094..2875
DNA (1782bp) protein (594aa)
Lipid A export permease/ATP-binding protein MsbA Tax=uncultured bacterium CSLD10 RepID=G4WVV8_9BACT
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_209_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2913..3938)
DNA (1026bp) protein (342aa)
Metallophosphoesterase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW9_SOLUE
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_209_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3935..4609)
DNA (675bp) protein (225aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW8_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_209_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4642..5700)
DNA (1059bp) protein (353aa)
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein Tax=uncultured bacterium CSLG7 RepID=G4WV40_9BACT
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_209_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5697..6413)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9P698_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_209_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6633..7811
DNA (1179bp) protein (393aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003794535
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_209_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7842..9197)
DNA (1356bp) protein (452aa)
Response regulator in two-component reguatory system (EBP family) Tax=Ralstonia solanacearum SD54 RepID=V5AJE1_RALSL
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_209_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9194..10744)
DNA (1551bp) protein (517aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator Tax=Sorangium cellulosum (strain So ce56) RepID=A9ERV0_SORC5
PAS domain S-box {ECO:0000313|EMBL:CDM67133.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_209_10
unknown

Not on your lists

comp(10741..10887)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_209_11
unknown

Not on your lists

11136..11303
DNA (168bp) protein (56aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_209_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11327..11485)
DNA (159bp) protein (53aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_209_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11561..13867
DNA (2307bp) protein (769aa)
Penicillin-binding protein, 1A family Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZBE9_ANACC
penicillin-binding protein, 1A family
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_65_b1_redo_sep16_scaffold_209_14
unknown

Not on your lists

13920..14213
DNA (294bp) protein (98aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_209_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14210..14497
DNA (288bp) protein (96aa)
10 kDa chaperonin Tax=Thermodesulfatator RepID=F8A9M2_THEID
Chaperonin Cpn10
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_209_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

14509..16131
DNA (1623bp) protein (541aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_65_b1_redo_sep16_scaffold_209_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16234..17118
DNA (885bp) protein (295aa)
FHA domain/GGDEF domain-containing protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U967_MYXSD
FHA domain/GGDEF domain-containing protein
FHA domain/GGDEF domain-containing protein {ECO:0000313|EMBL:AGC42984.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM4_65_b1_redo_sep16_scaffold_209_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(17171..17749)
DNA (579bp) protein (193aa)
hypothetical protein bin=CD_OP8_4m species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_209_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(17874..18428)
DNA (555bp) protein (185aa)
Putative uncharacterized protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_209_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18599..19474
DNA (876bp) protein (292aa)
Putative uncharacterized protein Tax=Magnetospirillum gryphiswaldense RepID=A4U5J6_9PROT
conserved protein of unknown function, containing Diguanylate cyclase/phosphodiesterase and PAS/PAC sensor domain
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM4_65_b1_redo_sep16_scaffold_209_21
unknown

Not on your lists

19494..19658
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_209_22
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19669..20982)
DNA (1314bp) protein (438aa)
Uncharacterized protein Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GAQ5_DESGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW13259.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
PLM4_65_b1_redo_sep16_scaffold_209_23
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(21050..22441)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INA9_KORVE
hypothetical protein
Tax=RBG_13_Aminicenantes_59_9_curated
PLM4_65_b1_redo_sep16_scaffold_209_24
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22563..23738
DNA (1176bp) protein (392aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Lyngbya sp. PCC 8106 genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM4_65_b1_redo_sep16_scaffold_209_25
unknown

Not on your lists

23735..24529
DNA (795bp) protein (265aa)
TonB-like protein
PLM4_65_b1_redo_sep16_scaffold_209_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

24547..26526
DNA (1980bp) protein (660aa)
Putative alpha-glucosidase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZN91_OPITP
alpha-glucosidase
Putative alpha-glucosidase {ECO:0000313|EMBL:ACB73460.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_b1_redo_sep16_scaffold_209_27

Not on your lists

comp(26579..29230)
DNA (2652bp) protein (884aa)
Protein kinase/protein beta WD-40 repeat Tax=uncultured bacterium BAC10-4 RepID=Q4JIS4_9BACT
Protein kinase/protein beta WD-40 repeat {ECO:0000313|EMBL:AAY96687.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
serine/threonine protein kinase
PLM4_65_b1_redo_sep16_scaffold_209_28
unknown

Not on your lists

comp(29288..29398)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_209_29
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

29590..30552
DNA (963bp) protein (321aa)
Transglycosylase SLT domain protein Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2KY20_9FIRM
slt; soluble lytic murein transglycosylase precursor
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
PLM4_65_b1_redo_sep16_scaffold_209_30
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

31076..31477
DNA (402bp) protein (134aa)
ACT domain-containing protein bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 1-30 of 54 in total

View Taxonomy