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PLM4_65_b1_redo_sep16_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_428_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)
id=12555756 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(328..681)
DNA (354bp) protein (118aa)
TPR Domain containing protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-linked GlcNAc transferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

879..1961
DNA (1083bp) protein (361aa)
competence protein Tax=Thermus igniterrae RepID=UPI00035F6785
DNA polymerase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1958..3388
DNA (1431bp) protein (477aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJM1_THEM7
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3414..4295
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC Tax=Geobacter metallireducens RepID=Q39R67_GEOMG
xerC; site-specific recombinase XerC
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4409..4999
DNA (591bp) protein (197aa)
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-70 family RNA polymerase sigma factor
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5026..5685
DNA (660bp) protein (220aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5691..6488
DNA (798bp) protein (266aa)
PREDICTED: uncharacterized protein LOC101324016 Tax=Tursiops truncatus RepID=UPI0002C2FD62
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6636..7007)
DNA (372bp) protein (124aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7049..8248
DNA (1200bp) protein (400aa)
Putative Fibronectin, type III bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fibronectin type III
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8327..8995
DNA (669bp) protein (223aa)
Probable transaldolase Tax=Caldithrix abyssi DSM 13497 RepID=H1XQQ4_9BACT
transaldolase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

9001..9237
DNA (237bp) protein (79aa)
Regulatory protein, FmdB family Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RND0_ACCPU
FmdB family regulatory protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

9242..10786
DNA (1545bp) protein (515aa)
Carboxyl transferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R8_SOLUE
carboxyl transferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10783..12306
DNA (1524bp) protein (508aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.3.4.14 6.4.1.1)
Acetyl CoA carboxylase, biotin carboxylase subunit bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12303..12794
DNA (492bp) protein (164aa)
Biotin/lipoic acid binding domain protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U8W9_9DELT
biotin/lipoyl attachment domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12804..16730
DNA (3927bp) protein (1309aa)
hypothetical protein; K09800 hypothetical protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16730..19390
DNA (2661bp) protein (887aa)
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
outer membrane protein/protective antigen OMA87
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_428_18
unknown

Not on your lists

19380..20066
DNA (687bp) protein (229aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_428_19
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(20030..20773)
DNA (744bp) protein (248aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.117)
Conserved hypothtical protein bin=GWA2_Planctomycetia_40_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Tax=BJP_IG2102_BRC1_58_13
PLM4_65_b1_redo_sep16_scaffold_428_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20770..21495)
DNA (726bp) protein (242aa)
Glycosyl transferase group 1 Tax=Rhodopirellula baltica WH47 RepID=F2AKE2_RHOBT
mtfA; mannosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21492..22538)
DNA (1047bp) protein (349aa)
Glycosyl transferase group 1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G3F4_CHLAD
group 1 glycosyl transferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_22
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22535..22891)
DNA (357bp) protein (119aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_23
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

23011..24306
DNA (1296bp) protein (432aa)
metW; Methionine biosynthesis protein MetW bin=CNBR_ACIDO species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methyltransferase type 11
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(24282..25004)
DNA (723bp) protein (241aa)
Methyltransferase type 11 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVZ7_ROSS1
type 11 methyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_25
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(25025..26002)
DNA (978bp) protein (326aa)
nucleoside-diphosphate-sugar epimerase bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM4_65_b1_redo_sep16_scaffold_428_26
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25999..27021)
DNA (1023bp) protein (341aa)
Sialic acid synthase Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB91_MAGSA
sialic acid synthase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM4_65_b1_redo_sep16_scaffold_428_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(27056..28396)
DNA (1341bp) protein (447aa)
Nucleotide sugar dehydrogenase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJP1_ANASK
nucleotide sugar dehydrogenase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(28410..29531)
DNA (1122bp) protein (374aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Thermoanaerobacter Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0B7_THESM
pyridoxal phosphate-dependent protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_29
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(29528..30520)
DNA (993bp) protein (331aa)
Putative nucleotide sugar epimerase/dehydratase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9S9_CALAS
putative nucleotide sugar epimerase/dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_428_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(30517..31281)
DNA (765bp) protein (255aa)
Glycosyl transferase family 2 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUU6_HERA2
glycosyl transferase family protein
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying items 1-30 of 45 in total

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