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PLM4_65_b1_redo_sep16_scaffold_473

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_473_1
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)
Alanine racemase bin=GWD2_Chloroflexi_49_16 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
alanine racemase
Tax=GWC2_Chloroflexi_49_37_curated
PLM4_65_b1_redo_sep16_scaffold_473_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(561..923)
DNA (363bp) protein (121aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_3
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1059..2555)
DNA (1497bp) protein (499aa)
L-arabinose isomerase
L-arabinose isomerase bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_4
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2612..3814)
DNA (1203bp) protein (401aa)
Selenocysteine lyase / isopenicillin N epimerase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FM65_SORC5
Aminotransferase, class V {ECO:0000313|EMBL:EKE98535.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
selenocysteine lyase / isopenicillin N epimerase
PLM4_65_b1_redo_sep16_scaffold_473_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3850..4728)
DNA (879bp) protein (293aa)
5'-3' exonuclease bin=bin9_gal15 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
5'-3' exonuclease
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4725..6044)
DNA (1320bp) protein (440aa)
Amino acid permease Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A775_GEMAT
amino acid permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_65_b1_redo_sep16_scaffold_473_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6095..6811)
DNA (717bp) protein (239aa)
Putative uncharacterized protein Tax=Moorea producens 3L RepID=F4XVH4_9CYAN
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6808..7992)
DNA (1185bp) protein (395aa)
NADH dehydrogenase (Quinone) Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQ05_9BACT
NADH ubiquinone oxidoreductase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8270..9154
DNA (885bp) protein (295aa)
Putative Transposase Tax=Candidatus Nitrospira defluvii RepID=D8PE53_9BACT
putative transposase
Putative Transposase {ECO:0000313|EMBL:CBK41512.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_473_10
unknown

Not on your lists

comp(9346..10296)
DNA (951bp) protein (317aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_473_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10647..11006
DNA (360bp) protein (120aa)
Iron-sulfur cluster assembly accessory protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKB1_9CHLR
iron-sulfur cluster assembly accessory family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11077..11988
DNA (912bp) protein (304aa)
Putative Serine protease do-like bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
PDZ/DHR/GLGF domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_473_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11978..12784)
DNA (807bp) protein (269aa)
Integral membrane protein Tax=Saccharopolyspora erythraea RepID=A4FLC5_SACEN
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EQD83791.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM4_65_b1_redo_sep16_scaffold_473_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12857..14110
DNA (1254bp) protein (418aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI000378F201
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_473_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14107..14406)
DNA (300bp) protein (100aa)
5-oxoprolinase (ATP-hydrolyzing) bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_473_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14466..16229
DNA (1764bp) protein (588aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK15_NITSI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
PLM4_65_b1_redo_sep16_scaffold_473_17
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

16226..17650
DNA (1425bp) protein (475aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IES2_9CHLR
hypothetical protein
Tax=BJP_IG2158_Actinobacteria_57_21
PLM4_65_b1_redo_sep16_scaffold_473_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17623..19122)
DNA (1500bp) protein (500aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GNG3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55441.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_473_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19226..20044)
DNA (819bp) protein (273aa)
Putative uncharacterized protein bin=GWD2_Bacteroidales_45_23 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
PLM4_65_b1_redo_sep16_scaffold_473_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20112..20750)
DNA (639bp) protein (213aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_473_21
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

20878..22326
DNA (1449bp) protein (483aa)
hypothetical protein; K12941 aminobenzoyl-glutamate utilization protein B bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Eudoraea adriatica genus=Eudoraea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_65_b1_redo_sep16_scaffold_473_22
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(22338..23510)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C358A
major facilitator superfamily protein
Tax=RBG_16_Aminicenantes_66_30_curated
PLM4_65_b1_redo_sep16_scaffold_473_23
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(23507..24265)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003802118
hypothetical protein
Tax=RBG_16_Aminicenantes_66_30_curated
PLM4_65_b1_redo_sep16_scaffold_473_24
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(24277..25173)
DNA (897bp) protein (299aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037ADA87
ROK family transcriptional regulator
Tax=RBG_16_Aminicenantes_66_30_curated
PLM4_65_b1_redo_sep16_scaffold_473_25
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25214..26416
DNA (1203bp) protein (401aa)
Putative Subtilisin {ECO:0000313|EMBL:CBS89844.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CBS89844.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative Subtilisin Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDZ6_AZOL4
putative Subtilisin
PLM4_65_b1_redo_sep16_scaffold_473_26
unknown

Not on your lists

26413..26754
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_473_27
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26785..27714
DNA (930bp) protein (310aa)
UPI0003CEA3B9 related cluster Tax=unknown RepID=UPI0003CEA3B9
Uncharacterized protein {ECO:0000313|EMBL:ESY01479.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_473_28
GWB1_OP11_38_8b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(27721..28197)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ87786.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8b.;"
Putative stress-responsive transcriptional regulator bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
phage shock protein C
PLM4_65_b1_redo_sep16_scaffold_473_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

28419..29120
DNA (702bp) protein (234aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003741074
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_473_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29117..29779
DNA (663bp) protein (221aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003741074
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 41 in total

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