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PLM4_65_b1_redo_sep16_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_480_1
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..1400)
DNA (1398bp) protein (466aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZG9_ANATU
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM4_65_b1_redo_sep16_scaffold_480_2
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1405..2574)
DNA (1170bp) protein (390aa)
xylA; xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Xylose isomerase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0Z5_ANATU
PLM4_65_b1_redo_sep16_scaffold_480_3
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

2734..3255
DNA (522bp) protein (174aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027H9_SOLUE
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_480_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3269..4234)
DNA (966bp) protein (322aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QI5_SOLUE
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABJ88085.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_480_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4345..6348)
DNA (2004bp) protein (668aa)
Antirepressor regulating drug resistance protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D950_SINAD
antirepressor regulating drug resistance protein
Antirepressor regulating drug resistance protein {ECO:0000313|EMBL:AGA25777.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_65_b1_redo_sep16_scaffold_480_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6351..6737)
DNA (387bp) protein (129aa)
Putative transcriptional regulator Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAB6_SINAD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA25778.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_65_b1_redo_sep16_scaffold_480_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6876..8030)
DNA (1155bp) protein (385aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003713E73
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:ABJ82167.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_480_8
unknown

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8204..8311
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_480_9

Not on your lists

8320..9342
DNA (1023bp) protein (341aa)
Conserved hypothetical membrane protein Tax=uncultured microorganism RepID=F8UH36_9ZZZZ
Conserved hypothetical membrane protein {ECO:0000313|EMBL:AEI30343.1}; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_480_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9346..10992)
DNA (1647bp) protein (549aa)
Tetratricopeptide repeat domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ31_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_480_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11117..11800)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM38_KORVE
two component transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_480_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11797..13527)
DNA (1731bp) protein (577aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Integral membrane sensor signal transduction histidine kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A30_SOLUE
integral membrane sensor signal transduction histidine kinase
PLM4_65_b1_redo_sep16_scaffold_480_13
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13692..14285
DNA (594bp) protein (198aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WKI0_GEOS8
hypothetical protein
Tax=CG_Mariprof_03
PLM4_65_b1_redo_sep16_scaffold_480_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14286..15047
DNA (762bp) protein (254aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_480_15
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..16143
DNA (918bp) protein (306aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_65_b1_redo_sep16_scaffold_480_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

16152..16802
DNA (651bp) protein (217aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000382E4D4
hypothetical protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_65_b1_redo_sep16_scaffold_480_17
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(16864..18348)
DNA (1485bp) protein (495aa)
ATP-binding region ATPase domain protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXF1_NITHN
ATP-binding region ATPase domain-containing protein
Tax=CG_Arma_01
PLM4_65_b1_redo_sep16_scaffold_480_18
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18345..19874)
DNA (1530bp) protein (510aa)
ABC transporter, substrate-binding protein, family 5 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSX9_9PROT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFH09591.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
h16_A1300; ABC transporter periplasmic protein
PLM4_65_b1_redo_sep16_scaffold_480_19
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19930..22029
DNA (2100bp) protein (700aa)
Putative enzyme {ECO:0000313|EMBL:CCE10530.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCE10530.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Putative enzyme Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVP2_9BRAD
putative enzyme
PLM4_65_b1_redo_sep16_scaffold_480_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22041..23333
DNA (1293bp) protein (431aa)
L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype {ECO:0000313|EMBL:CDM64174.1}; EC=5.3.1.5 {ECO:0000313|EMBL:CDM64174.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sugar isomerase Tax=Herbaspirillum lusitanum RepID=UPI0002F0E57F
sugar isomerase
PLM4_65_b1_redo_sep16_scaffold_480_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23411..24832
DNA (1422bp) protein (474aa)
Pentulose/hexulose kinase {ECO:0000313|EMBL:CDM64175.1}; EC=2.7.1.5 {ECO:0000313|EMBL:CDM64175.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Rhamnose kinase Tax=Streptomyces griseoaurantiacus M045 RepID=F3NEZ6_9ACTO
carbohydrate kinase FGGY
PLM4_65_b1_redo_sep16_scaffold_480_22

Not on your lists

comp(24829..25521)
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:AGT45819.1}; species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M2.;"
PLM4_65_b1_redo_sep16_scaffold_480_23
unknown

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comp(25521..26189)
DNA (669bp) protein (223aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_480_24
unknown

Not on your lists

comp(26186..26761)
DNA (576bp) protein (192aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_480_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

27086..28618
DNA (1533bp) protein (511aa)
Putative Hybrid sensor histidine kinase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_b1_redo_sep16_scaffold_480_26
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28746..31511
DNA (2766bp) protein (922aa)
Putative uncharacterized protein bin=CD_OP8_4m species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Uncharacterized protein {ECO:0000313|EMBL:EHB93495.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
alpha-L-rhamnosidase
PLM4_65_b1_redo_sep16_scaffold_480_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31504..31752)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2V2_PELCD
Membrane protein {ECO:0000313|EMBL:EZQ19887.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_480_28
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31970..33340
DNA (1371bp) protein (457aa)
Putative uncharacterized protein Tax=marine gamma proteobacterium HTCC2148 RepID=B7RX23_9GAMM
ATP/ADP translocase-like protein
Tax=CG_Delta_07
PLM4_65_b1_redo_sep16_scaffold_480_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

33471..33992
DNA (522bp) protein (174aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003778FA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43076.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_480_30
unknown

Not on your lists

34087..34737
DNA (651bp) protein (217aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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