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PLM4_65_b1_redo_sep16_scaffold_869

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_869_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1..600
DNA (600bp) protein (200aa)
tnaA; tryptophanase (EC:4.1.99.1); K01667 tryptophanase [EC:4.1.99.1] bin=bin8_Chloro species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
tnaA; tryptophanase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

678..2855
DNA (2178bp) protein (726aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase bin=GWF2_Lentisphaerae_49_21 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
PLM4_65_b1_redo_sep16_scaffold_869_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2863..3375)
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025K7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83312.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_869_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3372..3839)
DNA (468bp) protein (156aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025K8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83311.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_869_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3836..4393)
DNA (558bp) protein (186aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025K9_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83310.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_869_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4478..5311
DNA (834bp) protein (278aa)
Radical SAM domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
radical SAM domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_7
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5518..6414
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=Leptonema illini DSM 21528 RepID=H2CLJ0_9LEPT
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ04601.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
PLM4_65_b1_redo_sep16_scaffold_869_8
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(6418..7722)
DNA (1305bp) protein (435aa)
Multi-sensor signal transduction histidine kinase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMH2_ROSCS
multi-sensor signal transduction histidine kinase
Tax=CG_Arma_01
PLM4_65_b1_redo_sep16_scaffold_869_9
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7719..9155)
DNA (1437bp) protein (479aa)
Uncharacterized protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LHT2_THEPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV11627.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
PLM4_65_b1_redo_sep16_scaffold_869_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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9267..11483
DNA (2217bp) protein (739aa)
Spermine synthase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPX3_ROSCS
spermine synthase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_11
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11541..12020)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYU8_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09766.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_65_b1_redo_sep16_scaffold_869_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12159..13319
DNA (1161bp) protein (387aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13331..14863
DNA (1533bp) protein (511aa)
Uncharacterized protein Tax=Microcoleus sp. PCC 7113 RepID=K9WHH5_9CYAN
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14933..15688
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85508.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_869_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15678..16838)
DNA (1161bp) protein (387aa)
Oxidoreductase domain protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF83_RUNSL
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEI48960.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
PLM4_65_b1_redo_sep16_scaffold_869_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16886..18211)
DNA (1326bp) protein (442aa)
polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=CNBR_ACIDO species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cca; polynucleotide adenylyltransferase/metal-dependent phosphohydrolase (EC:2.7.7.72)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_17
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

18377..18790
DNA (414bp) protein (138aa)
HTH-type transcriptional repressor YtrA Tax=Paenibacillus alvei DSM 29 RepID=K4Z9L8_PAEAL
Uncharacterized protein {ECO:0000313|EMBL:KDA53177.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
GntR family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_869_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

18787..19551
DNA (765bp) protein (255aa)
ABC-type multidrug transport system, ATPase component Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG01_SINAD
multidrug ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_869_19
unknown

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19548..21539
DNA (1992bp) protein (664aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_869_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21526..22221)
DNA (696bp) protein (232aa)
PREDICTED: similar to CG9523 CG9523-PA Tax=Tribolium castaneum RepID=UPI0000D56136
filamentation induced by cAMP protein Fic
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

22296..22727
DNA (432bp) protein (144aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_869_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22890..24479)
DNA (1590bp) protein (530aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_b1_redo_sep16_scaffold_869_23
unknown

Not on your lists

comp(24615..25349)
DNA (735bp) protein (245aa)
id=12554563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PLM4_65_b1_redo_sep16_scaffold_869_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

25399..27063
DNA (1665bp) protein (555aa)
glucose-methanol-choline oxidoreductase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:CDM64608.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glucose-methanol-choline oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_869_25
unknown

Not on your lists

comp(27194..27544)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_869_26
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27683..29044)
DNA (1362bp) protein (454aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
Acetate CoA-transferase YdiF Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EXD3_EMTOG
3-oxoacid CoA-transferase, B subunit
PLM4_65_b1_redo_sep16_scaffold_869_27
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(29112..29744)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Eimeria mitis RepID=U6KCE9_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ34456.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
ftsY; cell division protein FtsY
PLM4_65_b1_redo_sep16_scaffold_869_28
unknown

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comp(29754..30167)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_869_29
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(30164..30919)
DNA (756bp) protein (252aa)
Prephenate dehydrogenase bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
tyrA; prephenate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM4_65_b1_redo_sep16_scaffold_869_30
unknown

Not on your lists

comp(30921..32513)
DNA (1593bp) protein (531aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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