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PLM4_65_b1_redo_sep16_scaffold_933

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_933_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_933_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

75..2291
DNA (2217bp) protein (739aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL4_KORVE
serine/threonin protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_933_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2308..4527
DNA (2220bp) protein (740aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL4_KORVE
serine/threonin protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_933_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4544..6763
DNA (2220bp) protein (740aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL4_KORVE
serine/threonin protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_933_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7161..7637
DNA (477bp) protein (159aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL4_KORVE
serine/threonin protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_933_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7739..10783
DNA (3045bp) protein (1015aa)
Transcriptional regulator Tax=Cupriavidus basilensis OR16 RepID=H1SIA7_9BURK
Large transcriptional regulator {ECO:0000313|EMBL:AKF10699.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
regulatory protein, LuxR
PLM4_65_b1_redo_sep16_scaffold_933_7
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10780..11307
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KQ95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC04055.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_933_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11473..12051
DNA (579bp) protein (193aa)
OsmC family protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI73_ANADF
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ABS28419.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_933_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12159..13397
DNA (1239bp) protein (413aa)
Putative flavoprotein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI72_ANADF
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:ABS28418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_933_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13429..14613
DNA (1185bp) protein (395aa)
Monooxygenase FAD-binding Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI71_ANADF
FAD-binding monooxygenase
Monooxygenase FAD-binding {ECO:0000313|EMBL:ABS28417.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_933_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14630..15055
DNA (426bp) protein (142aa)
MaoC domain protein dehydratase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI70_ANADF
dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ABS28416.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_933_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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15058..15915
DNA (858bp) protein (286aa)
Probable transmembrane protein Tax=Ralstonia solanacearum (strain GMI1000) RepID=Q8XRX1_RALSO
Permease of the drug/metabolite transporter (DMT) protein {ECO:0000313|EMBL:KFE60843.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
RSp0710; hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_933_13
Caldithrix abyssi, Caldithrix, Bacteria

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15942..17045
DNA (1104bp) protein (368aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XUJ0_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO40489.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_933_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17058..17744
DNA (687bp) protein (229aa)
Heme-transporting ATPase {ECO:0000256|SAAS:SAAS00083071}; EC=3.6.3.41 {ECO:0000256|SAAS:SAAS00083071};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Heme ABC exporter, ATP-binding protein CcmA Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQH7_MYXFH
heme ABC exporter, ATP-binding protein CcmA
PLM4_65_b1_redo_sep16_scaffold_933_15
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17741..18406
DNA (666bp) protein (222aa)
Heme exporter protein B Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TVV0_9DELT
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
heme exporter protein CcmB
PLM4_65_b1_redo_sep16_scaffold_933_16
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18416..19147
DNA (732bp) protein (244aa)
Cytochrome c-type biogenesis protein, heme exporter protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFB4_STIAD
cytochrome c-type biogenesis protein, heme exporter protein
Cytochrome c-type biogenesis protein, heme exporter protein {ECO:0000313|EMBL:ADO71481.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_65_b1_redo_sep16_scaffold_933_17
unknown

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19144..19293
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_933_18
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19232..19828
DNA (597bp) protein (199aa)
Cytochrome c-type biogenesis protein CcmE Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0B9_CORCM
Cytochrome C biogenesis protein CcmE {ECO:0000313|EMBL:KFA88457.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ccmE; cytochrome c-type biogenesis protein CcmE
PLM4_65_b1_redo_sep16_scaffold_933_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19825..21780
DNA (1956bp) protein (652aa)
Cytochrome c-type biogenesis protein CcmF Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFB1_STIAD
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:AKF82099.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
ccmF; cytochrome c-type biogenesis protein CcmF
PLM4_65_b1_redo_sep16_scaffold_933_20
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21777..22307
DNA (531bp) protein (177aa)
Thiol:disulfide interchange protein DsbE Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHR9_MYXSD
thiol:disulfide interchange protein DsbE
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:AGC45984.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM4_65_b1_redo_sep16_scaffold_933_21
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22304..22876
DNA (573bp) protein (191aa)
CcmH family cytochrome c biogenesis protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0B5_CORCM
Cytochrome c heme lyase subunit CcmL {ECO:0000313|EMBL:KFE66677.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ccl2; CcmH family cytochrome c biogenesis protein
PLM4_65_b1_redo_sep16_scaffold_933_22
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22876..24240
DNA (1365bp) protein (455aa)
Cytochrome c biogenesis factor Tax=Modestobacter marinus (strain BC501) RepID=I4EUI2_MODMB
Uncharacterized protein {ECO:0000313|EMBL:AKF82105.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
cytochrome c biogenesis factor
PLM4_65_b1_redo_sep16_scaffold_933_23
bacterium UASB14, Bacteria

Not on your lists

24440..25474
DNA (1035bp) protein (345aa)
Uroporphyrinogen decarboxylase Tax=Melioribacter roseus (strain P3M) RepID=I6YXN0_MELRP
Uroporphyrinogen decarboxylase, URO-D {ECO:0000313|EMBL:GAK51643.1}; species="Bacteria.;" source="bacterium UASB14.;"
uroporphyrinogen decarboxylase
PLM4_65_b1_redo_sep16_scaffold_933_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25490..26383)
DNA (894bp) protein (298aa)
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.-)
1,4-dihydroxy-2-naphthoate octaprenyltransferase Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NGC9_9EURY
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:ERG96185.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
PLM4_65_b1_redo_sep16_scaffold_933_25
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26451..26870
DNA (420bp) protein (140aa)
GTPase (EC:3.6.1.-)
GTPase Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ERI3_CUPNN
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_b1_redo_sep16_scaffold_933_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26965..27474)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00037BB8E1
protein of unknown function DUF664
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_933_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27498..27983)
DNA (486bp) protein (162aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_933_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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28080..28394
DNA (315bp) protein (105aa)
class V aminotransferase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Lewinella persica genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_933_29
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(28370..30715)
DNA (2346bp) protein (782aa)
Transketolase domain protein bin=GWF2_Methylomirabilis_70_14 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_933_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

30761..31375
DNA (615bp) protein (205aa)
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying items 1-30 of 31 in total

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