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PLM4_65_b1_redo_sep16_scaffold_963

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_963_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1184)
DNA (1182bp) protein (394aa)
Cystathionine beta-synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_65_b1_redo_sep16_scaffold_963_2
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1239..2606)
DNA (1368bp) protein (456aa)
MATE efflux family protein Tax=delta proteobacterium NaphS2 RepID=D8EXA2_9DELT
MATE efflux family protein {ECO:0000313|EMBL:EFK11880.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
MATE efflux family protein
PLM4_65_b1_redo_sep16_scaffold_963_3
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(2669..3799)
DNA (1131bp) protein (377aa)
Dihydrouridine synthase-like family protein Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1DY86_MICSR
Dihydrouridine synthase-like family protein {ECO:0000313|EMBL:ACO60901.1}; species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga).;"
nifR3 family TIM-barrel protein
PLM4_65_b1_redo_sep16_scaffold_963_4
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(3796..5649)
DNA (1854bp) protein (618aa)
ABC transporter permease Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B72828
ABC transporter ATPase
Tax=RBG_16_NC10_65_8_curated
PLM4_65_b1_redo_sep16_scaffold_963_5
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

6179..7075
DNA (897bp) protein (299aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XUU8_9BACT
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EHO41647.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
ferredoxin-NADP(+) reductase subunit alpha
PLM4_65_b1_redo_sep16_scaffold_963_6
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

7072..8505
DNA (1434bp) protein (478aa)
Glutamate synthase (NADPH), homotetrameric Tax=Caldithrix abyssi DSM 13497 RepID=H1XUU9_9BACT
oxidoreductase
Tax=CG_CP02_01
PLM4_65_b1_redo_sep16_scaffold_963_7
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..15871)
DNA (7341bp) protein (2447aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_963_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15933..17231)
DNA (1299bp) protein (433aa)
Acetyl-CoA hydrolase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
acetyl-CoA hydrolase/transferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_963_9
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(17228..18349)
DNA (1122bp) protein (374aa)
ald; Alanine dehydrogenase (Stage V sporulation protein N) (EC:1.4.1.1) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ald; Alanine dehydrogenase (EC:1.4.1.1)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_963_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(18402..18659)
DNA (258bp) protein (86aa)
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_963_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18656..20089)
DNA (1434bp) protein (478aa)
Thiamine pyrophosphate protein domain protein TPP-binding Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHU5_ANADF
thiamine pyrophosphate binding domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_963_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20086..21498)
DNA (1413bp) protein (471aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein bin=GWA2_Elusimicrobia_69_24 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_963_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22285..23598
DNA (1314bp) protein (438aa)
HNH endonuclease Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAH6_ANADF
HNH endonuclease
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_963_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(23703..26765)
DNA (3063bp) protein (1021aa)
Acriflavin resistance protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RND family efflux pump inner membrane protein
PLM4_65_b1_redo_sep16_scaffold_963_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(26765..27892)
DNA (1128bp) protein (376aa)
Efflux pump, RND family, membrane fusion protein bin=GWC2_Pelobacter_58_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM4_65_b1_redo_sep16_scaffold_963_trna_1
unknown

Not on your lists

comp(28076..28147)
DNA (72bp)
transferRNA Lys
PLM4_65_b1_redo_sep16_scaffold_963_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(28194..29498)
DNA (1305bp) protein (435aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK04_CHLTF
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_963_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

29553..31124
DNA (1572bp) protein (524aa)
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGG8_CHLTF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_963_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31148..31558
DNA (411bp) protein (137aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase Tax=Rhodanobacter spathiphylli B39 RepID=I4W010_9GAMM
Displaying 19 items

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