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PLM4_65_b1_redo_sep16_scaffold_8763

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8763_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3..224
DNA (222bp) protein (74aa)
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsU; 30S ribosomal protein S21
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_8763_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

401..739
DNA (339bp) protein (113aa)
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
anti-anti-sigma factor
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_8763_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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783..1685
DNA (903bp) protein (301aa)
Putative conserved membrane protein bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_8763_4
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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1694..2266
DNA (573bp) protein (191aa)
Tax=RBG_13_RIF03_48_7_curated
PLM4_65_b1_redo_sep16_scaffold_8763_5
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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2263..3348
DNA (1086bp) protein (362aa)
glycosyltransferase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
glycosyltransferase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_8763_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3345..4406
DNA (1062bp) protein (354aa)
group 1 glycosyl transferase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
glycosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_8763_7
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

4403..5599
DNA (1197bp) protein (399aa)
hexosyltransferase bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
group 1 glycosyl transferase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_8763_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(5596..7017)
DNA (1422bp) protein (474aa)
HNH endonuclease bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
HNH nuclease
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM4_65_b1_redo_sep16_scaffold_8763_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7129..7989)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P0Y9_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_8763_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8071..9513)
DNA (1443bp) protein (481aa)
two component, sigma54 specific, Fis family transcriptional regulator bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sigma-54 dependent DNA-binding response regulator
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_8763_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9515..10525)
DNA (1011bp) protein (337aa)
multi-sensor signal transduction histidine kinase bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 11 items

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