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PLM4_65_b1_redo_sep16_scaffold_12468

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_12468_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(75..1076)
DNA (1002bp) protein (334aa)
integron integrase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integron integrase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_12468_2
unknown

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1354..1737
DNA (384bp) protein (128aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_12468_3
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(1771..5172)
DNA (3402bp) protein (1134aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_65_b1_redo_sep16_scaffold_12468_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5552..6709
DNA (1158bp) protein (386aa)
Aminotransferase class I and II Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKK7_HALO1
Aspartate aminotransferase {ECO:0000313|EMBL:KIG16838.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
class I and II aminotransferase
PLM4_65_b1_redo_sep16_scaffold_12468_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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6757..7926
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036AF707
Na+/H+ antiporter NhaD-like permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_12468_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7923..8699)
DNA (777bp) protein (259aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase A
Tax=GWA2_Ignavibacteria_54_16_curated
Displaying 6 items

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