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PLM4_65_b1_redo_sep16_scaffold_5317

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5317_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(3..773)
DNA (771bp) protein (257aa)
Microcin-processing peptidase 1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH91_KORVE
microcin-processing peptidase 1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_65_b1_redo_sep16_scaffold_5317_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(788..2053)
DNA (1266bp) protein (422aa)
ial:IALB_3049 Major facilitator superfamily permease bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Major facilitator superfamily permease
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2050..3471)
DNA (1422bp) protein (474aa)
Putative peptidase TldD bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
microcin-processing peptidase 2
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3594..4904
DNA (1311bp) protein (437aa)
Secretion protein HlyD Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILC6_KORVE
secretion protein HlyD
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4901..5626
DNA (726bp) protein (242aa)
ABC transporter related Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ND9_SOLUE
ABC transporter-like protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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5637..6878
DNA (1242bp) protein (414aa)
efflux ABC transporter, macrolide exporter (MacB) family, permease protein; K02004 putative ABC transport system permease protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
macrolide ABC transporter permease
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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6878..8134
DNA (1257bp) protein (419aa)
ABC efflux pump, inner membrane subunit bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
efflux ABC transporter inner membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8205..8942
DNA (738bp) protein (246aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A11_SOLUE
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_65_b1_redo_sep16_scaffold_5317_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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9002..9916
DNA (915bp) protein (305aa)
translocation protein TolB Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
transcriptional regulatory protein-like
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5317_trna_1
unknown

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10042..10115
DNA (74bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_5317_10
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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10455..12539
DNA (2085bp) protein (695aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00035E061C
WD40 domain-containing protein beta Propeller
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_65_b1_redo_sep16_scaffold_5317_11
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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12690..13475
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z4D3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGE04629.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
PLM4_65_b1_redo_sep16_scaffold_5317_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(13662..14597)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036887F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86353.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_5317_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(14608..15921)
DNA (1314bp) protein (438aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ73_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43077.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_5317_14
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16291..17076
DNA (786bp) protein (262aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003629D10
major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:BAP88226.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
PLM4_65_b1_redo_sep16_scaffold_5317_15
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17164..18393
DNA (1230bp) protein (410aa)
putative cytochrome c (EC:1.1.99.3)
Alcohol dehydrogenase cytochrome c subunit Tax=Cesiribacter andamanensis AMV16 RepID=M7NX05_9BACT
Alcohol dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:EMR02989.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
PLM4_65_b1_redo_sep16_scaffold_5317_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18516..18971
DNA (456bp) protein (152aa)
(2Fe-2S)-binding protein Tax=Rudaea cellulosilytica RepID=UPI00035EEDE5
(2Fe-2S)-binding protein {ECO:0000313|EMBL:GAN45065.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
(2Fe-2S)-binding protein
PLM4_65_b1_redo_sep16_scaffold_5317_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18974..21145
DNA (2172bp) protein (724aa)
twin-arginine translocation pathway signal protein Tax=Methylotenera sp. 1P/1 RepID=UPI00037EFAC6
Uncharacterized protein {ECO:0000313|EMBL:KFN45987.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_5317_18
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21363..22928
DNA (1566bp) protein (522aa)
Peptidoglycan lytic exotransglycosylase {ECO:0000256|SAAS:SAAS00166192}; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
Transglycosylase SLT domain-containing protein Tax=Klebsiella RepID=D6GM17_9ENTR
transglycosylase SLT domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_5317_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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22960..24549
DNA (1590bp) protein (530aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Oscillochloris trichoides DG-6 RepID=E1IFV2_9CHLR
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_b1_redo_sep16_scaffold_5317_20
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24619..26229)
DNA (1611bp) protein (537aa)
Putative peptidase bin=GWC2_Deltaproteobacteria_42_51 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
peptidase S8/S53 subtilisin kexin sedolisin
Tax=CG_Delta_01
PLM4_65_b1_redo_sep16_scaffold_5317_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(26572..27075)
DNA (504bp) protein (168aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YX8_SOLUE
Carboxypeptidase regulatory-like domain {ECO:0000313|EMBL:CDM64190.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying 22 items

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