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PLM4_65_b1_redo_sep16_scaffold_5583

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_5583_1
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3..278)
DNA (276bp) protein (92aa)
Protein-tyrosine-phosphatase, putative Tax=Chthoniobacter flavus Ellin428 RepID=B4D9N8_9BACT
protein-tyrosine phosphatase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
PLM4_65_b1_redo_sep16_scaffold_5583_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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319..1425
DNA (1107bp) protein (369aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Multi-sensor signal transduction histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWI7_HERA2
multi-sensor signal transduction histidine kinase
PLM4_65_b1_redo_sep16_scaffold_5583_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1429..2901
DNA (1473bp) protein (491aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDM66983.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CDM66983.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Xaa-pro aminopeptidase bin=GWC2_Ignavibacteria_56_12 species=uncultured Chloroflexi bacterium HF0770_09E03 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptidase M24
PLM4_65_b1_redo_sep16_scaffold_5583_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2933..4261)
DNA (1329bp) protein (443aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=SYS_DESVM
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4325..5206
DNA (882bp) protein (294aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UDP-glucose pyrophosphorylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A85_SOLUE
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(5408..5755)
DNA (348bp) protein (116aa)
Putative regulatory protein, FmdB family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X69_SOLUE
FmdB family regulatory protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(5849..8518)
DNA (2670bp) protein (890aa)
polA-1; DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polA; DNA polymerase I
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8552..9268
DNA (717bp) protein (239aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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9343..10830
DNA (1488bp) protein (496aa)
Leucine aminopeptidase (Fragment) Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4J2_9AQUI
peptidase M17 leucyl aminopeptidase domain protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_10
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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11111..11857
DNA (747bp) protein (249aa)
ABC transporter, ATPase subunit; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ABC transporter ATPase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM4_65_b1_redo_sep16_scaffold_5583_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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11854..12996
DNA (1143bp) protein (381aa)
hypothetical protein; K02004 putative ABC transport system permease protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
efflux ABC transporter inner membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_5583_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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12999..13265
DNA (267bp) protein (89aa)
ABC efflux pump, inner membrane subunit bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
efflux ABC transporter inner membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 12 items

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