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PLM4_65_b1_redo_sep16_scaffold_1084

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1084_1
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..314)
DNA (312bp) protein (104aa)
Putative modular PKS system Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LP20_DINSH
putative modular PKS system
Putative modular PKS system {ECO:0000313|EMBL:ABV93702.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
PLM4_65_b1_redo_sep16_scaffold_1084_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(347..7960)
DNA (7614bp) protein (2538aa)
Beta-ketoacyl synthase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB0_SOLUE
Polyketide synthase modules and related proteins {ECO:0000313|EMBL:GAN33080.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
beta-ketoacyl synthase
PLM4_65_b1_redo_sep16_scaffold_1084_3
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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8215..9117
DNA (903bp) protein (301aa)
Methionine biosynthesis protein MetW-like protein bin=GWC1_OD1_38_17 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
methyltransferase
Tax=RBG_13_Nitrospirae_43_8_curated
PLM4_65_b1_redo_sep16_scaffold_1084_4
unknown

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comp(9102..9398)
DNA (297bp) protein (99aa)
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1084_5
unknown

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9625..11169
DNA (1545bp) protein (515aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1084_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11170..11796)
DNA (627bp) protein (209aa)
Putative uncharacterized protein Tax=Marichromatium purpuratum 984 RepID=F9U4V5_MARPU
Uncharacterized protein {ECO:0000313|EMBL:ETX00638.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1084_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11800..12564)
DNA (765bp) protein (255aa)
3'(2'),5'-bisphosphate nucleotidase Tax=Azoarcus sp. KH32C RepID=H0Q432_9RHOO
cysQ; 3'(2'),5'-bisphosphate nucleotidase
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:BAL25871.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
PLM4_65_b1_redo_sep16_scaffold_1084_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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12677..13639
DNA (963bp) protein (321aa)
Sulfate adenylyltransferase subunit 2 Tax=Azoarcus sp. KH32C RepID=H0Q431_9RHOO
cysD; sulfate adenylyltransferase, small subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_1084_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13735..15549
DNA (1815bp) protein (605aa)
adenylylsulfate kinase Tax=Azoarcus toluclasticus RepID=UPI00037F3233
cysC_cysN; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_65_b1_redo_sep16_scaffold_1084_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

15620..16108
DNA (489bp) protein (163aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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16155..17318
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P486_9BACT
MglA protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1084_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(17323..18591)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=cyanobacterium PCC 7702 RepID=UPI000372E0DD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43187.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_1084_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(18569..19777)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00036A200D
hexosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19774..20958)
DNA (1185bp) protein (395aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hexosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20955..21425)
DNA (471bp) protein (157aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21665..22642)
DNA (978bp) protein (326aa)
id=12554100 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_1084_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

22833..24479
DNA (1647bp) protein (549aa)
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase, catalytic
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

24585..26117
DNA (1533bp) protein (511aa)
Mg chelatase, subunit ChlI Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKE7_RHOMR
Mg chelatase subunit ChlI
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

26232..27128
DNA (897bp) protein (299aa)
M23 peptidase domain-containing protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MKH0_CORCM
yebA2; M23 peptidase domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1084_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

27408..29729
DNA (2322bp) protein (774aa)
protein translocase subunit SecA; K03070 preprotein translocase subunit SecA bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secA; preprotein translocase subunit SecA
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 20 items

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