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PLM4_65_b1_redo_sep16_scaffold_1735

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1735_1
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..733
DNA (732bp) protein (244aa)
hypothetical protein Tax=beta proteobacterium L13 RepID=UPI00037054CE
Signal protein {ECO:0000313|EMBL:EKE84542.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
diguanylate phosphodiesterase
PLM4_65_b1_redo_sep16_scaffold_1735_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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730..1107
DNA (378bp) protein (126aa)
Response regulator Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNA1_CORCM
evgS; response regulator
Response regulator {ECO:0000313|EMBL:AFE08682.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_65_b1_redo_sep16_scaffold_1735_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1576..2598
DNA (1023bp) protein (341aa)
GAF domain protein bin=GWD2_Nitrospirae-related_57_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1735_4
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2612..3385
DNA (774bp) protein (258aa)
Phospholipid/glycerol acyltransferase Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NSS8_TRES6
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEB14316.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
PLM4_65_b1_redo_sep16_scaffold_1735_5
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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3447..4265
DNA (819bp) protein (273aa)
Cobyrinic acid a,c-diamide synthase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATR8_PELPD
cobyrinic acid a,c-diamide synthase
Tax=CG_Delta_07
PLM4_65_b1_redo_sep16_scaffold_1735_6
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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4234..5184
DNA (951bp) protein (317aa)
Putative uncharacterized protein Tax=Branchiostoma floridae RepID=C3ZNP6_BRAFL
Putative uncharacterized protein {ECO:0000313|EMBL:EEN45778.1}; species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
RND superfamily drug exporter-like protein
PLM4_65_b1_redo_sep16_scaffold_1735_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(5196..6173)
DNA (978bp) protein (326aa)
Putative oxidoreductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ72_ANATU
putative oxidoreductase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_1735_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6170..7126)
DNA (957bp) protein (319aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=Plesiocystis pacifica SIR-1 RepID=A6GH91_9DELT
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_1735_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(7136..8026)
DNA (891bp) protein (297aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUI8_OPITP
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1735_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(8036..9826)
DNA (1791bp) protein (597aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUI6_OPITP
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1735_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(10023..12344)
DNA (2322bp) protein (774aa)
ATP-dependent helicase HrpB bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent helicase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_1735_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12443..12643
DNA (201bp) protein (67aa)
Inner membrane protein Tax=mine drainage metagenome RepID=T1BNK5_9ZZZZ
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1735_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(12660..13166)
DNA (507bp) protein (169aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI0003726E11
cupin 2 domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_1735_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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13324..15054
DNA (1731bp) protein (577aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364D470
serine/threonin protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_1735_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(15264..16982)
DNA (1719bp) protein (573aa)
Serine/threonine protein kinase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8C5_SPHTD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACZ40068.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM4_65_b1_redo_sep16_scaffold_1735_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(17167..18051)
DNA (885bp) protein (295aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E3FD
PBS lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_1735_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18062..19333)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB4_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_1735_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(19349..20092)
DNA (744bp) protein (248aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88157.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_1735_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20089..20649)
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB2_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1735_20
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20745..23534
DNA (2790bp) protein (930aa)
GDSL-like lipase/acylhydrolase domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNM0_9BACT
GDSL-like lipase/acylhydrolase domain protein {ECO:0000313|EMBL:EDY82074.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
penicillin-binding protein, beta-lactamase class C
PLM4_65_b1_redo_sep16_scaffold_1735_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23531..24769
DNA (1239bp) protein (413aa)
Cysteine desulfurase family protein {ECO:0000313|EMBL:EEF60511.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EEF60511.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Cysteine desulfurase family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI18_9BACT
cysteine desulfurase family protein
PLM4_65_b1_redo_sep16_scaffold_1735_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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24787..25275
DNA (489bp) protein (163aa)
Methyltransferase type 11 Tax=Cystobacter fuscus DSM 2262 RepID=S9QSW8_9DELT
type 11 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 22 items

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