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PLM4_65_b1_redo_sep16_scaffold_1913

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1913_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3..653
DNA (651bp) protein (217aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] bin=CNBR_ACIDO species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_1913_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

650..1939
DNA (1290bp) protein (430aa)
Dihydroorotase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotase, multifunctional complex type
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1913_3
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1986..2942)
DNA (957bp) protein (319aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
alcohol dehydrogenase Tax=Fischerella muscicola RepID=UPI00030D20D9
Alcohol dehydrogenase {ECO:0000313|EMBL:KIF28894.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
PLM4_65_b1_redo_sep16_scaffold_1913_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3068..4735)
DNA (1668bp) protein (556aa)
Peptidase M28 Tax=Cystobacter fuscus DSM 2262 RepID=S9PL09_9DELT
Peptidase M28 {ECO:0000313|EMBL:KFA90181.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
M28 family peptidase
PLM4_65_b1_redo_sep16_scaffold_1913_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4883..5605
DNA (723bp) protein (241aa)
hypothetical protein bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_1913_6
unknown

Not on your lists

5602..5961
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1913_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5967..7262)
DNA (1296bp) protein (432aa)
group 1 glycosyl transferase bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
group 1 glycosyl transferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7278..7799)
DNA (522bp) protein (174aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7811..8143)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P0R3_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8177..8317
DNA (141bp) protein (47aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8305..10050
DNA (1746bp) protein (582aa)
Na+/solute symporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A25_SOLUE
Na+/solute symporter
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10213..12108
DNA (1896bp) protein (632aa)
Small GTP-binding protein bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
small GTP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_1913_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12108..12569
DNA (462bp) protein (154aa)
DtxR family iron (metal) dependent repressor
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_b1_redo_sep16_scaffold_1913_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12879..13610)
DNA (732bp) protein (244aa)
LmbE-like protein Tax=mine drainage metagenome RepID=E6QML7_9ZZZZ
LmbE family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13607..14719)
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0S8_GRAMM
group 1 glycosyl transferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14716..16344)
DNA (1629bp) protein (543aa)
UPF0747 protein Rhom172_2214 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI57_RHOMR
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16515..18692
DNA (2178bp) protein (726aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U30_SOLUE
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18698..19891
DNA (1194bp) protein (398aa)
Forkhead-associated protein Tax=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) RepID=A9WEE2_CHLAA
forkhead-associated protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19888..20523
DNA (636bp) protein (212aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW8_SOLUE
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1913_20
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

20582..21787
DNA (1206bp) protein (402aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Carbamoyl-phosphate synthase small chain Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIY9_CHLTF
PLM4_65_b1_redo_sep16_scaffold_1913_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

21794..22888
DNA (1095bp) protein (365aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase large chain Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0X3_DESTD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 21 items

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