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PLM4_65_b1_redo_sep16_scaffold_6290

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6290_1
RLO_RIF02_62_27, RIF2, Bacteria

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2..1645
DNA (1644bp) protein (548aa)
4-amino-4-deoxy-L-arabinose transferase bin=GWF2_Lentisphaerae_50_93 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM4_65_b1_redo_sep16_scaffold_6290_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1642..3270
DNA (1629bp) protein (543aa)
GtrA family protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEK6_ANADF
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ABS27152.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_b1_redo_sep16_scaffold_6290_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3267..4934
DNA (1668bp) protein (556aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZX0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84795.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_6290_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4965..5903)
DNA (939bp) protein (313aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA pseudouridine synthase B Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DAM3_MYXXD
truB; tRNA pseudouridine synthase B
PLM4_65_b1_redo_sep16_scaffold_6290_5
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5910..6320)
DNA (411bp) protein (137aa)
Ribosome-binding factor A Tax=Thermincola potens (strain JR) RepID=D5XF14_THEPJ
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM4_65_b1_redo_sep16_scaffold_6290_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(6317..6598)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E7M4_9FIRM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_6290_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6830..9577)
DNA (2748bp) protein (916aa)
Translation initiation factor IF-2 Tax=Solibacter usitatus (strain Ellin6076) RepID=IF2_SOLUE
translation initiation factor 2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_6290_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(9564..11108)
DNA (1545bp) protein (515aa)
NusA antitermination factor; K02600 N utilization substance protein A bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nusA; transcription termination factor NusA
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_6290_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(11123..11587)
DNA (465bp) protein (155aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=CNBR_ACIDO species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_6290_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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11834..12463
DNA (630bp) protein (210aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SI1_SOLUE
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
Displaying 10 items

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