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PLM4_65_b1_redo_sep16_scaffold_2714

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2714_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Rhodopirellula europaea 6C RepID=M2AAC8_9PLAN
gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(244..1929)
DNA (1686bp) protein (562aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1926..2672)
DNA (747bp) protein (249aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2669..4291)
DNA (1623bp) protein (541aa)
Transglutaminase-like protein bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transglutaminase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2714_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4346..5089
DNA (744bp) protein (248aa)
RNA methyltransferase, TrmH family, group 1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CU65_9ALTE
RNA methyltransferase
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_b1_redo_sep16_scaffold_2714_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5109..5621
DNA (513bp) protein (171aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5682..6908
DNA (1227bp) protein (409aa)
Small GTP-binding protein Tax=uncultured prokaryote RepID=H5SLU7_9ZZZZ
HSR1-like GTP-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6905..8215
DNA (1311bp) protein (437aa)
id=24441475 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Zinc finger-domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8246..8920
DNA (675bp) protein (225aa)
cyclic nucleotide-binding protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B55924
cyclic nucleotide-binding regulatory protein Crp
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8930..9379)
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Heat shock protein Hsp20
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9503..12133)
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mutS-1; DNA mismatch repair ATPase MutS-1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2714_12
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

12161..12817
DNA (657bp) protein (219aa)
Peptidase M22 glycoprotease bin=GWB2_Proteobacteria_55_19 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
yeaZ; universal bacterial protein glycoprotease YeaZ
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
PLM4_65_b1_redo_sep16_scaffold_2714_13
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12814..13296
DNA (483bp) protein (161aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EGY27349.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EGY27349.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
Ribosomal-protein-alanine acetyltransferase Tax=Desulfovibrio sp. A2 RepID=G2H3R9_9DELT
alanine acetyltransferase
PLM4_65_b1_redo_sep16_scaffold_2714_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13411..13641
DNA (231bp) protein (77aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003769AD8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2714_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13701..14462
DNA (762bp) protein (254aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] bin=bin7_NC10_sister species=Halomonas jeotgali genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphatidylserine synthase
Tax=CSP1_6_Rokubacteria
PLM4_65_b1_redo_sep16_scaffold_2714_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14459..14881
DNA (423bp) protein (141aa)
NUDIX hydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRZ8_KORVE
NUDIX hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_2714_17
unknown

Not on your lists

14977..15231
DNA (255bp) protein (85aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2714_18
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15455..15763)
DNA (309bp) protein (103aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_2714_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(15877..16758)
DNA (882bp) protein (294aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_2714_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16773..17858)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUF6_METPS
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2714_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

18073..19275
DNA (1203bp) protein (401aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GMP synthase
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 21 items

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