ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_2898

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2898_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..836)
DNA (834bp) protein (278aa)
BatA protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHN2_MYXSD
BatA protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(836..1783)
DNA (948bp) protein (316aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UM22_MYXSD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1783..2649)
DNA (867bp) protein (289aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D0M0_MYXXD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2887..3885)
DNA (999bp) protein (333aa)
ATPase AAA Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B47B0A
AAA family ATPase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4057..4293)
DNA (237bp) protein (79aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4340..5299
DNA (960bp) protein (320aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase bin=GWF2_Syntrophobacterales_56_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5307..5912
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNA0_SIDLE
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_b1_redo_sep16_scaffold_2898_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5920..7107
DNA (1188bp) protein (396aa)
Putative glycosyltransferase Tax=Citreicella sp. 357 RepID=I1AQ79_9RHOB
putative glycosyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7171..8517
DNA (1347bp) protein (449aa)
Putative uncharacterized protein Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21DN1_SACD2
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8514..9965)
DNA (1452bp) protein (484aa)
Malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10064..12511
DNA (2448bp) protein (816aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4L1_MYXSD
permease
Permease {ECO:0000313|EMBL:AHG89563.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_2898_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12548..14590)
DNA (2043bp) protein (681aa)
id=3545730 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14587..15966)
DNA (1380bp) protein (460aa)
Tetratricopeptide TPR_4 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5I5_CHLAD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2898_14
unknown

Not on your lists

16018..16446
DNA (429bp) protein (143aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2898_15
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16475..17413)
DNA (939bp) protein (313aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQH4_SYNFM
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
PLM4_65_b1_redo_sep16_scaffold_2898_16
unknown

Not on your lists

comp(17377..17541)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2898_17
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17538..18647)
DNA (1110bp) protein (370aa)
Radical SAM domain protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
radical SAM domain-containing protein
Tax=RBG_16_Chloroflexi_48_8_curated
Displaying 17 items

View Taxonomy