ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_68201

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_68201_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..475
DNA (474bp) protein (158aa)
Transposase (Fragment) Tax=mine drainage metagenome RepID=T1CJ52_9ZZZZ
putative IS4 family transposase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_b1_redo_sep16_scaffold_68201_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(667..1227)
DNA (561bp) protein (187aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_68201_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1323..1730)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_b1_redo_sep16_scaffold_68201_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1727..1939)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8I2_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_b1_redo_sep16_scaffold_68201_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2536..3627
DNA (1092bp) protein (364aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI000368AAC7
RND family efflux transporter MFP subunit
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_68201_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

3620..4363
DNA (744bp) protein (248aa)
Phosphonate-transporting ATPase Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFP4_9FIRM
macrolide ABC transporter ATP-binding protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_68201_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

4374..5642
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54585.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Putative uncharacterized protein bin=GWF1_Spirochaetes_51_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
MacB-like periplasmic core domain containing protein
PLM4_65_b1_redo_sep16_scaffold_68201_8
unknown

Not on your lists

5644..5718
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 8 items

View Taxonomy