ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_103606

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_103606_1

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Geobacter sp. (strain M18) RepID=E8WLS7_GEOS8
Marine sediment metagenome DNA, contig: S01H1_L00520 {ECO:0000313|EMBL:GAF84377.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_b1_redo_sep16_scaffold_103606_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(302..727)
DNA (426bp) protein (142aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_65_b1_redo_sep16_scaffold_103606_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(724..1950)
DNA (1227bp) protein (409aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Tryptophan synthase beta chain Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NMR3_ROSCS
tryptophan synthase subunit beta
PLM4_65_b1_redo_sep16_scaffold_103606_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1947..2633)
DNA (687bp) protein (229aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AU12_PSERE
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_103606_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3438..4487)
DNA (1050bp) protein (350aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMM1_DESK7
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 5 items

View Taxonomy