ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_245_11

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(13716..15101)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator Tax=Desulfovibrio longus RepID=UPI0003B5499F similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 469.0
  • Bit_score: 383
  • Evalue 1.90e-103
atoC; acetoacetate metabolism regulatory protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 466.0
  • Bit_score: 377
  • Evalue 3.80e-102
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EPR31510.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 460.0
  • Bit_score: 377
  • Evalue 1.90e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio alkalitolerans → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGAACGGGCGGGGAACCAGAGGGCGGGTGCTCGTCGTGGAGGACGAGGCCTACGTCCGCGACTCGCTCGTCGAGATCCTGCGCGCGCGCGGCTTCGACGCGAGCGCGGCGGCGACGGTGAAGGATGCGCTCGAGCTCCTGTCGCGGGCGCCCGTGGACGTGGTGCTGTCGGACCTCCGGATGCCGGGCGAGGACGGGCTGCAGCTCGTGCGCCGGATGCAGAGCACGACCCCGGACGTCCCGGTGCTGATCCTGACCGGCCACGGCACCGTGGCGTCGGCGGTCGAGTGTCTGAGGGCGGGGGCGATCGACTACGTGTTGAAGCCCGTCGAGCCGGACGCGCTCGAGCTCGCGCTCGAGCGGGCGCTCGAGGGGCGCGCCCTGCGGCGCGAGGTGCGCTACCTGCGCGGTGCCGTCGCGGGCGAGAGCGCCGCCATGATCGGCGAGAGCGCGCCCTGGCGGCGCGCGATCGCGATGGTCGAGGCGACGGCGCCGGTCGACGCGGTCGTGCTGGTGACCGGCGAGTCGGGCACGGGCAAGGAGCTGCTGGCGCGGCACCTGCACGCCCTCTCCGCGCGGGCCGCGGGCCCCTTCGTCAAGGTCAACTGCGCGGCGGTGCCGCTCGAGATGTGGGAGAGCGAGTTCTTCGGCCACCGCAAGGGCTCGTTCACCGGTGCGTCGTCCGACCGCGACGGCCGCTTCCAGCTCGCCGACCGCGGCACGCTGCTGCTCGACGAGGTGGGCGCGATGCCGGCGGCGGGCCAGGCCAAGCTGCTGCGCGCGATCCAGGACGGTGAGTTCGAGCGGCTGGGCGATCAGCAGGCGACGCGGGTCGACGTGCGGGTAGTGGCGTCGACGAACAGCGACCTCGAGGCCGAGGTCCAGCAGGGCCGTTTCCGGGCCGACCTCTTCTACCGGCTAAACGTGGTCCGGATCGTGGTGCCGGCGCTGCGCGAGCGCAAGGAAGACATCCCGCCGCTCGCGCGCCACTTCGCGGCGCTGATCGCCTCGCGGCTGGGGCGCCCCGCGCCGGAGCTCCAGCCCGCGACGCTCGCGCGGCTCGCGGCCTACCACTGGCCTGGCAACGTGCGCGAGCTGCGCAACGTCATCGAGCGCGCGATGATCCTCGACCCGGCTCAGGGGCTCGAGGCGCTCGACCTGGCGCAGGCCGGAGCGCCCTCGCTGCACGCGGCCTCGGGCCCCGCCGACCGCGACCTCAACCTGCGCGAGTCGCTCAACCGCCTGGAACGCGAGCTGCTGCTCGAGGCGCAGCGACGCGCGGGCGGCGTGCGCAAGCAGGCAGCACACCTGCTGGGCATCGACCCACGCAACCTCGCCTACTACCTGCACAAGCACGGCCTCGCCGCCGACGGCAGCGAGGACTGA
PROTEIN sequence
Length: 462
MNGRGTRGRVLVVEDEAYVRDSLVEILRARGFDASAAATVKDALELLSRAPVDVVLSDLRMPGEDGLQLVRRMQSTTPDVPVLILTGHGTVASAVECLRAGAIDYVLKPVEPDALELALERALEGRALRREVRYLRGAVAGESAAMIGESAPWRRAIAMVEATAPVDAVVLVTGESGTGKELLARHLHALSARAAGPFVKVNCAAVPLEMWESEFFGHRKGSFTGASSDRDGRFQLADRGTLLLDEVGAMPAAGQAKLLRAIQDGEFERLGDQQATRVDVRVVASTNSDLEAEVQQGRFRADLFYRLNVVRIVVPALRERKEDIPPLARHFAALIASRLGRPAPELQPATLARLAAYHWPGNVRELRNVIERAMILDPAQGLEALDLAQAGAPSLHAASGPADRDLNLRESLNRLERELLLEAQRRAGGVRKQAAHLLGIDPRNLAYYLHKHGLAADGSED*