ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_65_b1_redo_sep16_scaffold_2316_20

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: 20740..21213

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P9E4_DEFDS similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 148.0
  • Bit_score: 173
  • Evalue 1.30e-40
smpB; ssrA RNA (tmRNA)-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 148.0
  • Bit_score: 173
  • Evalue 3.70e-41
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 153.0
  • Bit_score: 231
  • Evalue 4.40e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGGTGGCGAAGACTGAGGCCGGCGAGCGCGCGCTCGCGACCAATCGCAAGGCGTTCTTCCACTACGAGGTGCTCGAGCGCGCCGAGGCCGGCATCGTCCTCGTCGGCACCGAGGTCAAGTCGATCCGCGCGGGCGGACTCGAGTTCAAGGACGCCTACGTCGACCCGAAGGGCAGCGAGCTCGTGCTCGTCGGCTGCCGGATCGCCCCCTACAGCCACGGCAACCTGATGAACCACGCCCCGGACCGCGACCGCAAGCTGCTGCTCCACAAGCGCGAGATCTTGAAGCTCATCAGCCGTGTCACCGAGCGCGGCCTGACGCTGCTGCCGCTGCGCGCCTACATGAAGAACGGCCGCGTGAAGGTCGAGATCGGCCTCGCCAAGGGCAAGCAAGCCCACGACAAGCGCGAGGCGATCAAGAAGAAGGACCAGGAGCGCGAAGCGCGCCAGGCGATGAGGGAGCGGAATCGATGA
PROTEIN sequence
Length: 158
VVAKTEAGERALATNRKAFFHYEVLERAEAGIVLVGTEVKSIRAGGLEFKDAYVDPKGSELVLVGCRIAPYSHGNLMNHAPDRDRKLLLHKREILKLISRVTERGLTLLPLRAYMKNGRVKVEIGLAKGKQAHDKREAIKKKDQEREARQAMRERNR*