ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4736_1

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(1..462)

Top 3 Functional Annotations

Value Algorithm Source
D-malate dehydrogenase {ECO:0000313|EMBL:EXJ10236.1}; EC=1.1.1.83 {ECO:0000313|EMBL:EXJ10236.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 153.0
  • Bit_score: 241
  • Evalue 7.10e-61
isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.93 4.1.1.73 1.1.1.83) similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 1.70e-59
tartrate dehydrogenase Tax=Fodinicurvata sediminis RepID=UPI0003B42DD8 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 154.0
  • Bit_score: 240
  • Evalue 1.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrincola sp. AK23 → Nitrincola → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGCGCCAGCTTCGGATCGCGGTCATCCCTGGGGACGGCATCGGCAAGGAGGTCATTCCCGAGGGGATCCGGGTCCTCGATGCTGTCGGCGCCAGACACGGCGTGTCCTTCCGGTGGGACGAGTTCCCGTGGGGTTGCCAGTACCACCTGGCCCATGGCCGGATGATGCCCGAGGACGGCCTGGAGCAGATCCGGGGCCACGACGCCATCTACCTCGGCGCCGTGGGCTTTCCCGGCGTCCCCGACCATGTCTCGCTCTGGGGTCTGCTCATCCCCATCCGGCGCGGCTTCCGCCAGTACGCCAACGTCCGGCCGGTCCGCCTCATGCGCGGCGTGCCCTGCCCGCTTACGGGAAGGCAGCCCGGGGACATCGACTTCGTCGTGGTGAGGGAGAACACCGAGGGCGAGTACAGCAGCATCGGCGGTCGCCTCTACGAGGGCACCGAGGACGAGCTCGTGGTG
PROTEIN sequence
Length: 154
MRQLRIAVIPGDGIGKEVIPEGIRVLDAVGARHGVSFRWDEFPWGCQYHLAHGRMMPEDGLEQIRGHDAIYLGAVGFPGVPDHVSLWGLLIPIRRGFRQYANVRPVRLMRGVPCPLTGRQPGDIDFVVVRENTEGEYSSIGGRLYEGTEDELVV