ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3263

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3263_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

41..661
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Solibacter usitatus (strain Ellin6076) RepID=RUVA_SOLUE
ruvA; Holliday junction DNA helicase RuvA
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_3263_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

668..1690
DNA (1023bp) protein (341aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ruvB; Holliday junction DNA helicase RuvB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_3263_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1769..2278
DNA (510bp) protein (170aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABJ81957.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ABJ81957.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AG5_SOLUE
PLM3-1_170_b1_sep16_scaffold_3263_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2346..3215)
DNA (870bp) protein (290aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003761393
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_3263_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3538..4914
DNA (1377bp) protein (459aa)
Amidase, hydantoinase/carbamoylase family Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIT8_RHOMR
amidase, hydantoinase/carbamoylase family
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:AHG88947.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b1_sep16_scaffold_3263_6
unknown

Not on your lists

comp(4925..5530)
DNA (606bp) protein (202aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3263_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5725..6051
DNA (327bp) protein (109aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F3656
Uncharacterized protein {ECO:0000313|EMBL:ETX06479.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3263_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6145..7254
DNA (1110bp) protein (370aa)
Fe-S protein, radical SAM family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU25_KORVE
radical SAM protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_3263_9
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7408..8049)
DNA (642bp) protein (214aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VK2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_3263_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8206..8919)
DNA (714bp) protein (238aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R36_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_3263_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9113..10675
DNA (1563bp) protein (521aa)
D-Ala-D-Ala carboxypeptidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II05_KORVE
D-alanyl-D-alanine carboxypeptidase
D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ABF43495.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_3263_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10681..11232
DNA (552bp) protein (184aa)
DNA-binding protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B55475
Rossmann fold nucleotide-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Displaying 12 items

View Taxonomy