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PLM3-1_170_b1_sep16_scaffold_2434

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2434_1
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..762)
DNA (762bp) protein (254aa)
Outer membrane efflux protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYA7_ACISM
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADW68734.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM3-1_170_b1_sep16_scaffold_2434_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1056..1643
DNA (588bp) protein (196aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b1_sep16_scaffold_2434_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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1953..3002
DNA (1050bp) protein (350aa)
Metal dependent phosphohydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II97_KORVE
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_2434_4
unknown

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3150..4646
DNA (1497bp) protein (499aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2434_5
unknown

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4804..5142
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2434_6
unknown

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5301..5909
DNA (609bp) protein (203aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2434_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6200..6541
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHW3_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69254.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b1_sep16_scaffold_2434_8
unknown

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6861..7466
DNA (606bp) protein (202aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2434_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7996..8331
DNA (336bp) protein (112aa)
Secreted protein Tax=Gramella forsetii (strain KT0803) RepID=A0M009_GRAFK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_2434_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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8435..8980
DNA (546bp) protein (182aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366B99A
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3-1_170_b1_sep16_scaffold_2434_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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9536..10102
DNA (567bp) protein (189aa)
Methylthioribulose-1-phosphate dehydratase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWK0_PIRSD
methylthioribulose-1-phosphate dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_2434_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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10115..10690
DNA (576bp) protein (192aa)
Acireductone dioxygenase Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFR6_9CYAN
Acireductone dioxygenase ARD
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_2434_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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10702..11451
DNA (750bp) protein (250aa)
Enolase-phosphatase E1 Tax=Synechococcus elongatus RepID=MTNC_SYNE7
enolase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_2434_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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11491..12297
DNA (807bp) protein (269aa)
tRNA pseudouridine synthase A Tax=uncultured Acidobacteria bacterium RepID=H5SFD1_9BACT
truA; tRNA pseudouridine synthase A
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_2434_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12318..13889
DNA (1572bp) protein (524aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
succinate-semialdehyde dehydrogenase (NAD(P)+)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_2434_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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13919..14182
DNA (264bp) protein (88aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QW1_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_2434_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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14193..15428
DNA (1236bp) protein (412aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-isopropylmalate synthase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase
PLM3-1_170_b1_sep16_scaffold_2434_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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15430..16731
DNA (1302bp) protein (434aa)
Peptidase M20 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ6_KORVE
peptidase M20
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_2434_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16728..18488
DNA (1761bp) protein (587aa)
Amidohydrolase 3 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ7_KORVE
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABF40443.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_2434_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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18961..19404
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITL1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39789.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 20 items

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