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PLM3-1_170_b1_sep16_scaffold_267

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_267_1
unknown

Not on your lists

comp(8..403)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_267_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

604..1116
DNA (513bp) protein (171aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00036D2A8A
Ketosteroid isomerase-like enzyme {ECO:0000313|EMBL:CDM65737.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_267_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1167..1646)
DNA (480bp) protein (160aa)
Hemoglobin-like protein HbN (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8P7L8_9BACT
glbN; hemoglobin-like protein HBN
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3-1_170_b1_sep16_scaffold_267_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1975..2622)
DNA (648bp) protein (216aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_267_5
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

2769..3755
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL99588.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_267_6
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

3854..4630
DNA (777bp) protein (259aa)
Glycosyl transferase family 2 bin=CD_OP8_4m species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Glycosyltransferases involved in cell wall biogenesis
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3-1_170_b1_sep16_scaffold_267_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4660..6012)
DNA (1353bp) protein (451aa)
nsd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_267_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6144..7871)
DNA (1728bp) protein (576aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367F8D4
carbamoyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_267_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7920..9182)
DNA (1263bp) protein (421aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SUS4_9BACT
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3-1_170_b1_sep16_scaffold_267_10
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9265..10299)
DNA (1035bp) protein (345aa)
Glycosyl transferase family 4 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFD4_ROSCS
glycosyl transferase family protein
Glycosyl transferase family 4 {ECO:0000313|EMBL:ABU56156.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_170_b1_sep16_scaffold_267_11
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10331..11359)
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Bacillus cereus VD196 RepID=R8GN33_BACCE
galE; UDP-glucose 4-epimerase
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_267_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11356..12555)
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 bin=GWF2_Lentisphaerae_52_8 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b1_sep16_scaffold_267_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12602..14371)
DNA (1770bp) protein (590aa)
Nodulation protein nolNO bin=GWC2_Nitrospirae-rel_56_14 species=Cyanobium gracile genus=Cyanobium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative carbamoyl transferase, NodU family
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_267_14
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14398..16374)
DNA (1977bp) protein (659aa)
asnB; asparagine synthase (glutamine-hydrolysing) (EC:6.3.5.4)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000371F9D8
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM3-1_170_b1_sep16_scaffold_267_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(16402..17610)
DNA (1209bp) protein (403aa)
Putative glycosyltransferase Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGV9_METTF
LPS biosynthesis RfbU related protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3-1_170_b1_sep16_scaffold_267_16
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17757..18878)
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Azoarcus sp. KH32C RepID=H0PXQ1_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL23243.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
PLM3-1_170_b1_sep16_scaffold_267_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(18875..20059)
DNA (1185bp) protein (395aa)
UDP-glucose:(Heptosyl)LPS alpha-1,3-glucosyltransferase Tax=uncultured Acidobacteria bacterium RepID=H5SIV4_9BACT
group 1 glycosyl transferase
Tax=RBG_13_OP8X_37_8_curated
PLM3-1_170_b1_sep16_scaffold_267_18
GWA2_OD1_47_26, Parcubacteria, Bacteria

Not on your lists

comp(20075..21961)
DNA (1887bp) protein (629aa)
asnB; asparagine synthase (glutamine-hydrolysing) (EC:6.3.5.4)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000371F9D8
Asparagine synthetase {ECO:0000313|EMBL:KKU74098.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
PLM3-1_170_b1_sep16_scaffold_267_19
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21992..22651)
DNA (660bp) protein (220aa)
Putative uncharacterized protein Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z3W6_LISDA
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ40097.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium damselae subsp. damselae CIP 102761.;"
type 11 methyltransferase
PLM3-1_170_b1_sep16_scaffold_267_20
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22748..24361)
DNA (1614bp) protein (538aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U6D8_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
PLM3-1_170_b1_sep16_scaffold_267_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24345..24989)
DNA (645bp) protein (215aa)
Glycosyltransferase Tax=Microcoleus sp. PCC 7113 RepID=K9WLV2_9CYAN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFZ21390.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM3-1_170_b1_sep16_scaffold_267_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24967..26478)
DNA (1512bp) protein (504aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_267_23
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(26490..27188)
DNA (699bp) protein (233aa)
Methyltransferase Tax=Marinactinospora thermotolerans RepID=G8HX53_9ACTO
FkbM family methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
PLM3-1_170_b1_sep16_scaffold_267_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27446..28258)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000365125E
FkbM family methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_267_25
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(28255..28533)
DNA (279bp) protein (93aa)
Glycosyl transferase group 1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G377_CHLAD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL25250.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Displaying 25 items

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