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PLM3-1_170_b1_sep16_scaffold_313

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_313_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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1..846
DNA (846bp) protein (282aa)
TonB-dependent Receptor Plug Domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJT3_CHLTF
TonB-dependent Receptor Plug domain-containing protein
TonB-dependent Receptor Plug Domain protein {ECO:0000313|EMBL:AEP13100.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3-1_170_b1_sep16_scaffold_313_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1020..2114
DNA (1095bp) protein (365aa)
TPR repeat protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJK9_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_313_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2835..3182)
DNA (348bp) protein (116aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZZ1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84774.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_313_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3172..3327)
DNA (156bp) protein (52aa)
Succinylglutamate desuccinylase/aspartoacylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV8_SOLUE
succinylglutamate desuccinylase/aspartoacylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3-1_170_b1_sep16_scaffold_313_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3734..4057
DNA (324bp) protein (108aa)
Response regulator receiver protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ79_KORVE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABF40971.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_313_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(4030..5391)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM60_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_313_7
unknown

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comp(5592..6233)
DNA (642bp) protein (214aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_8
unknown

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comp(6235..6996)
DNA (762bp) protein (254aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_9
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7000..8010)
DNA (1011bp) protein (337aa)
respiratory nitrate reductase 1 beta chain (Nitratereductase subunit A beta) (Quinol-nitrate oxidoreductase subunitbeta) (EC:1.7.99.4)
Nitrate reductase beta chain bin=GWE1_T_denit_62_9 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b1_sep16_scaffold_313_10
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8021..10867)
DNA (2847bp) protein (949aa)
DMSO reductase family type II enzyme, molybdopterin subunit Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM55_AZOSU
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b1_sep16_scaffold_313_11
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10864..12381)
DNA (1518bp) protein (506aa)
cytochrome C Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4DBE6
cytochrome c class I
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b1_sep16_scaffold_313_12
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(12392..13945)
DNA (1554bp) protein (518aa)
cytochrome B6 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B67B7A
menaquinol-cytochrome c reductase cytochrome b subunit
Tax=RBG_16_Chloroflexi_57_8_curated
PLM3-1_170_b1_sep16_scaffold_313_13
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(13955..14443)
DNA (489bp) protein (163aa)
(2Fe-2S)-binding protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B35AEE
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_16_Chloroflexi_57_8_curated
PLM3-1_170_b1_sep16_scaffold_313_14
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(14431..16332)
DNA (1902bp) protein (634aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RBG_16_Chloroflexi_57_8_curated
PLM3-1_170_b1_sep16_scaffold_313_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(16403..16792)
DNA (390bp) protein (130aa)
Transcriptional regulator, BadM/Rrf2 family bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
BadM/Rrf2 family transcriptional regulator
Tax=GWC2_Nitrospirae_57_13_curated
PLM3-1_170_b1_sep16_scaffold_313_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17126..17692
DNA (567bp) protein (189aa)
Cytoplasmic protein Tax=Thermotoga sp. EMP RepID=J9H3Q1_9THEM
cytoplasmic protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_313_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(17761..18075)
DNA (315bp) protein (105aa)
Carboxymuconolactone decarboxylase Tax=Halobiforma lacisalsi AJ5 RepID=M0LYL1_9EURY
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EMA38268.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
gamma-carboxymuconolactone decarboxylase subunit like protein
PLM3-1_170_b1_sep16_scaffold_313_18

Not on your lists

comp(19038..20195)
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372A800
Uncharacterized protein {ECO:0000313|EMBL:KKM97052.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Integrative genetic element Ppu40, integrase
PLM3-1_170_b1_sep16_scaffold_313_19
unknown

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comp(20195..21016)
DNA (822bp) protein (274aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_20
unknown

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comp(21902..22072)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_21
unknown

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comp(23280..23549)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_22
unknown

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comp(23894..23989)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_313_23

Not on your lists

comp(23989..24546)
DNA (558bp) protein (186aa)
Terminase small subunit Tax=Ochrobactrum sp. CDB2 RepID=M3J2H1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN66911.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
terminase small subunit
PLM3-1_170_b1_sep16_scaffold_313_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24618..24959)
DNA (342bp) protein (114aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7Y4_SPHTD
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b1_sep16_scaffold_313_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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25069..25974
DNA (906bp) protein (302aa)
Subunit A 3-oxoadipate CoA-transferase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_313_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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25974..26408
DNA (435bp) protein (145aa)
catJ; 3-oxoadipate CoA-transferase (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B bin=CD_OP8_4m species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 26 items

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