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PLM3-1_170_b1_sep16_scaffold_428

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_428_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..348
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Elizabethkingia meningoseptica 502 RepID=T0PPI9_ELIME
Protein tyrosine/serine phosphatase
Tax=RBG_16_Gamma2_64_10_curated
PLM3-1_170_b1_sep16_scaffold_428_2
Shewanella sp. HN-41, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(398..1492)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein Tax=Shewanella sp. HN-41 RepID=F7RLP0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGM70788.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. HN-41.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_428_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1644..2882)
DNA (1239bp) protein (413aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT1_9BACT
efflux ABC transporter inner membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_428_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2887..4137)
DNA (1251bp) protein (417aa)
ABC efflux pump, inner membrane subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE
efflux ABC transporter inner membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_428_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4378..4980
DNA (603bp) protein (201aa)
hypothetical protein
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_428_6
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4995..5600
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T0_GEMAT
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3-1_170_b1_sep16_scaffold_428_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(5675..6184)
DNA (510bp) protein (170aa)
Methylated-DNA--protein-cysteine methyltransferase Tax=Asticcacaulis sp. AC466 RepID=V4R3G9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KDA53993.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
methylated-DNA--protein-cysteine methyltransferase
PLM3-1_170_b1_sep16_scaffold_428_8
Bacillus sp. NRRL B-14911, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6181..6765)
DNA (585bp) protein (195aa)
Adenosine deaminase Tax=Bacillus RepID=U5L6X7_9BACI
adenosine deaminase
Methylphosphotriester-DNA alkyltransferase {ECO:0000313|EMBL:EAR67506.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. NRRL B-14911.;"
PLM3-1_170_b1_sep16_scaffold_428_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6917..7822
DNA (906bp) protein (302aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B51ECB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40716.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_428_10
unknown

Not on your lists

comp(7885..8895)
DNA (1011bp) protein (337aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_428_11
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(9054..9917)
DNA (864bp) protein (288aa)
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rhodanese domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_428_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10124..11215
DNA (1092bp) protein (364aa)
Glutamine-fructose-6-phosphate transaminase (Isomerizing) bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar isomerase (SIS)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b1_sep16_scaffold_428_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11305..12570
DNA (1266bp) protein (422aa)
Streptogramin lyase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK50_RHOMR
streptogramin lyase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_428_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13261..14103
DNA (843bp) protein (281aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV7_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_428_15
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14157..15038
DNA (882bp) protein (294aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FBFCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32766.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3-1_170_b1_sep16_scaffold_428_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15117..17876
DNA (2760bp) protein (920aa)
AMP-dependent synthetase and ligase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMP1_KORVE
AMP-dependent synthetase/ligase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_428_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

18012..18875
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Paenibacillus barengoltzii G22 RepID=R9LDH0_9BACL
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_428_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18899..19909)
DNA (1011bp) protein (337aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCD4_MYXSD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_428_19
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19928..20347)
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos9D1 RepID=Q647V0_9ARCH
hypothetical protein
Tax=RBG_13_Chloroflexi_54_8_curated
PLM3-1_170_b1_sep16_scaffold_428_20
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

20492..21031
DNA (540bp) protein (180aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003748C80
bacterioferritin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_428_21

Not on your lists

comp(20925..22745)
DNA (1821bp) protein (607aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003691FC2
Amidase {ECO:0000313|EMBL:CBI00041.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amidase
PLM3-1_170_b1_sep16_scaffold_428_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22851..23465
DNA (615bp) protein (205aa)
amino acid permease bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amino acid transporter
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3-1_170_b1_sep16_scaffold_428_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23462..24166
DNA (705bp) protein (235aa)
amino acid permease bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amino acid permease
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 23 items

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