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PLM3-1_170_b1_sep16_scaffold_570

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_570_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1..507
DNA (507bp) protein (169aa)
Histidine triad (HIT) protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YK3_SOLUE
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABJ85262.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_570_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(1449..1739)
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_570_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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1841..2407
DNA (567bp) protein (189aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_570_4
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2998..4143
DNA (1146bp) protein (382aa)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABB15094.1}; EC=1.3.8.1 {ECO:0000313|EMBL:ABB15094.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
Butyryl-CoA dehydrogenase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACF1_CARHZ
PLM3-1_170_b1_sep16_scaffold_570_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4199..4633
DNA (435bp) protein (145aa)
30S ribosomal protein S23 bin=bin1_lowGC species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
S23 ribosomal protein
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b1_sep16_scaffold_570_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4685..5833
DNA (1149bp) protein (383aa)
UvrB/UvrC protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN8_KORVE
UvrB/UvrC protein
UvrB/UvrC protein {ECO:0000313|EMBL:ABF39062.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_570_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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5904..7013
DNA (1110bp) protein (370aa)
Predicted protein bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADP-dependent oxidoreductase domain protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(7061..7723)
DNA (663bp) protein (221aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9B1_ACIC5
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_9
unknown

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comp(7720..8370)
DNA (651bp) protein (217aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_570_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8549..8875
DNA (327bp) protein (109aa)
Type IV pilus assembly PilZ Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ24_KORVE
type IV pilus assembly PilZ
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8945..9172
DNA (228bp) protein (76aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST6_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_12
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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9197..9601
DNA (405bp) protein (135aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase bin=bin5_DeltaP species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
Tax=CSP1_8_Deltaproteobacteria
PLM3-1_170_b1_sep16_scaffold_570_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9642..10328
DNA (687bp) protein (229aa)
Haloacid dehalogenase-like hydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILC1_KORVE
haloacid dehalogenase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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10452..11588
DNA (1137bp) protein (379aa)
Selenocysteine lyase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHP9_ANADE
selenocysteine lyase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11606..12559
DNA (954bp) protein (318aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2-dehydropantoate 2-reductase Tax=Burkholderia sp. YI23 RepID=G8MF40_9BURK
2-dehydropantoate 2-reductase
PLM3-1_170_b1_sep16_scaffold_570_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(12578..14308)
DNA (1731bp) protein (577aa)
TonB-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITI5_KORVE
TonB-like protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14422..16179
DNA (1758bp) protein (586aa)
Uncharacterized protein Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0B0_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16184..16756)
DNA (573bp) protein (191aa)
methyltransferase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6E2D3
methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_570_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(16761..18884)
DNA (2124bp) protein (708aa)
ATP-dependent DNA helicase RecG Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NV9_SOLUE
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ABJ88661.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_570_20
RLO_PLX_64_10, Bacteria

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19037..21397
DNA (2361bp) protein (787aa)
Abortive infection protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023Y2_SOLUE
abortive infection protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying 20 items

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