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PLM3-1_170_b1_sep16_scaffold_938

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_938_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..859)
DNA (858bp) protein (286aa)
60 kDa chaperonin Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRC3_GRAMM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
chaperonin GroEL
PLM3-1_170_b1_sep16_scaffold_938_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(924..1244)
DNA (321bp) protein (107aa)
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Co-chaperonin GroES (HSP10)
10 kDa chaperonin bin=GWF2_Methylomirabilis_70_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PLM3-1_170_b1_sep16_scaffold_938_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1508..3478
DNA (1971bp) protein (657aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
signal transduction histidine kinase NtrB (EC:2.7.3.-)
Similar to histidine kinase protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZ69_9BACT
PLM3-1_170_b1_sep16_scaffold_938_4
RLO_PLX_64_10, Bacteria

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3504..4802
DNA (1299bp) protein (433aa)
Two-component response regulator Tax=planctomycete KSU-1 RepID=I3IHM7_9PLAN
sigma-54 dependent DNA-binding response regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_938_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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4866..5660
DNA (795bp) protein (265aa)
ABC transporter related Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XR7_SOLUE
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_938_6
Caldithrix abyssi, Caldithrix, Bacteria

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5756..7780
DNA (2025bp) protein (675aa)
Oligopeptide transporter, OPT family Tax=Caldithrix abyssi DSM 13497 RepID=H1XNQ2_9BACT
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EHO43290.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_938_7
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7796..8077)
DNA (282bp) protein (94aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase {ECO:0000313|EMBL:ADV81075.1}; EC=3.5.1.81 {ECO:0000313|EMBL:ADV81075.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
N-acyl-D-amino-acid deacylase Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0L2_TERSS
PLM3-1_170_b1_sep16_scaffold_938_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8059..8415)
DNA (357bp) protein (119aa)
amidohydrolase Tax=Sphingobium yanoikuyae RepID=UPI000262C10B
putative aminoacylase
Putative aminoacylase {ECO:0000313|EMBL:AGU51601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
PLM3-1_170_b1_sep16_scaffold_938_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8440..8901)
DNA (462bp) protein (154aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Azospirillum sp. (strain B510) RepID=D3P3E0_AZOS1
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:BAI74679.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3-1_170_b1_sep16_scaffold_938_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(8902..9561)
DNA (660bp) protein (220aa)
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] bin=bin9_gal15 species=Streptomyces sp. MspMP-M5 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
riboflavin synthase subunit alpha (EC:2.5.1.9)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_938_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9542..10672)
DNA (1131bp) protein (377aa)
Riboflavin biosynthesis protein RibD Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB2_KORVE
5-amino-6-(5-phosphoribosylamino)uracil reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_938_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10680..11633)
DNA (954bp) protein (318aa)
cell division protein FtsY Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371D203
signal recognition particle-docking protein FtsY
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_938_13
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11767..12405
DNA (639bp) protein (213aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI0002F8C359
Uncharacterized protein {ECO:0000313|EMBL:EPD90903.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
SCH69.12; dioxygenase
PLM3-1_170_b1_sep16_scaffold_938_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12424..14187)
DNA (1764bp) protein (588aa)
Metal dependent phosphohydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB4_KORVE
metal dependent phosphohydrolase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_938_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(14302..15306)
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Koribacter versatilis (strain Ellin345) RepID=GPDA_KORVE
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_938_16
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15323..15955)
DNA (633bp) protein (211aa)
Glycerol-3-phosphate acyltransferase Tax=Koribacter versatilis (strain Ellin345) RepID=PLSY_KORVE
acyl-phosphate glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_938_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(15952..16515)
DNA (564bp) protein (188aa)
2',5' RNA ligase Tax=Koribacter versatilis (strain Ellin345) IPR0_KORVE">RepID=Q1IPR0_KORVE
2'-5' RNA ligase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_938_18
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(16529..17782)
DNA (1254bp) protein (418aa)
CinA-like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA0_CHLTF
competence/damage-inducible protein CinA C-terminal domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_938_19
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(17854..18879)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ8_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_938_20

Not on your lists

comp(18879..19487)
DNA (609bp) protein (203aa)
Phosphatidylglycerophosphatase Tax=uncultured bacterium 89 RepID=E3T699_9BACT
Phosphatidylglycerophosphatase {ECO:0000313|EMBL:ADC35843.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 89.;"
putative phosphatidylglycerophosphatase A
PLM3-1_170_b1_sep16_scaffold_938_21
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

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comp(19471..19659)
DNA (189bp) protein (63aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P4U1_9BACT
hypothetical protein
Tax=RBG_16_Nitrospirae_43_11_curated
PLM3-1_170_b1_sep16_scaffold_938_22
unknown

Not on your lists

comp(19683..19943)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 22 items

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