ggKbase home page

PLM3-1_170_b1_sep16_scaffold_29715

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_29715_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
integrase
Putative integron integrase (Fragment) bin=GWF2_Methylomirabilis_70_14 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_29715_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(399..1085)
DNA (687bp) protein (229aa)
antimicrobial peptide ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
antimicrobial peptide ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_29715_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1104..2000)
DNA (897bp) protein (299aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain Tax=Paenibacillus barengoltzii G22 RepID=R9LS62_9BACL
appF3; Oligopeptide transport ATP-binding protein AppF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_29715_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2000..2524)
DNA (525bp) protein (175aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Putative peptide import ATP-binding protein BAB2_0817 Tax=Nitrospina gracilis 3/211 RepID=M1YL97_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 4 items

View Taxonomy