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PLM3-1_170_b1_sep16_scaffold_5106

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_5106_1
unknown

Not on your lists

comp(2..334)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_5106_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

876..1367
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_5106_3
unknown

Not on your lists

comp(1693..2256)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_5106_4
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2890..3174
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZP41_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81515.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_5106_5
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3332..3937
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZP42_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ81516.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_5106_6

Not on your lists

4289..4552
DNA (264bp) protein (88aa)
Transcriptional regulator Tax=mine drainage metagenome RepID=T1BEF9_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:EQD70413.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_5106_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5076..6518
DNA (1443bp) protein (481aa)
Retron-type reverse transcriptase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EFP4_THECK
prophage lambdaSa1 transcriptase/maturase family protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b1_sep16_scaffold_5106_8
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7115
DNA (573bp) protein (191aa)
transcriptional regulator Tax=Methylovulum miyakonense RepID=UPI0003624F6F
Divergent AAA domain protein {ECO:0000313|EMBL:EXI81699.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_5106_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7329..7700
DNA (372bp) protein (124aa)
Cobyrinic acid a,c-diamide synthase Tax=Dickeya zeae (strain Ech1591) RepID=C6CN25_DICZE
phage regulatory protein cII
Tax=CG_Delta_05
PLM3-1_170_b1_sep16_scaffold_5106_trna_1
unknown

Not on your lists

comp(7969..8042)
DNA (74bp)
transferRNA Pro
PLM3-1_170_b1_sep16_scaffold_5106_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8149..8790)
DNA (642bp) protein (214aa)
Putative integrase Tax=Orientia tsutsugamushi (strain Ikeda) RepID=B3CUB6_ORITI
integrase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_5106_11
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(8822..9097)
DNA (276bp) protein (92aa)
id=4325712 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3-1_170_b1_sep16_scaffold_5106_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9217..9531
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GDG4_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_5106_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10085..10624)
DNA (540bp) protein (180aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_5106_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(10651..11241)
DNA (591bp) protein (197aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_5106_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11287..11556)
DNA (270bp) protein (90aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Syntrophus aciditrophicus (strain SB) RepID=RNPH_SYNAS
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_5106_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11510..12013)
DNA (504bp) protein (168aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] bin=CNBR_ACIDO species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease PH
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_5106_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12013..12606)
DNA (594bp) protein (198aa)
hypothetical protein bin=CNBR_ACIDO species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
germane superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_5106_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12603..14138)
DNA (1536bp) protein (512aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
N-acetylmuramoyl-L-alanine amidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_5106_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14281..15789
DNA (1509bp) protein (503aa)
Malate dehydrogenase (EC:1.1.1.37) bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Malate dehydrogenase (EC:1.1.1.37)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_5106_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16158..17243
DNA (1086bp) protein (362aa)
MFS transporter bin=GWA2_Deltaproteo_65_63 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
arabinose efflux permease family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_5106_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17332..19545
DNA (2214bp) protein (738aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00035EEABD
putative membrane associated hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_5106_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19640..19960
DNA (321bp) protein (107aa)
id=12554310 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_5106_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19953..20360
DNA (408bp) protein (136aa)
id=12554309 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_5106_24
unknown

Not on your lists

comp(20388..20495)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_5106_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20630..22492
DNA (1863bp) protein (621aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00037F79E4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_5106_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22938..25796)
DNA (2859bp) protein (953aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003787C23
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_5106_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(26087..26500)
DNA (414bp) protein (138aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase (Fragment) Tax=mine drainage metagenome RepID=T1B417_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 28 items

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