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PLM3-1_170_b1_sep16_scaffold_1066

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1066_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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54..917
DNA (864bp) protein (288aa)
SAF domain Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028Y9_SOLUE
SAF domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_1066_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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954..2990
DNA (2037bp) protein (679aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F7C3E
type II and III secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3015..4199
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JTP3_DESFR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4215..5378
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E9F14
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5395..6759
DNA (1365bp) protein (455aa)
Type II/IV secretion system protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F480_ACIC5
type II/IV secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6759..7733
DNA (975bp) protein (325aa)
Pilus assembly protein bin=GWA2_Elusimicrobia_66_18 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
pilus assembly protein TadB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7735..8652
DNA (918bp) protein (306aa)
Type II secretion system protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB7_SOLUE
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8690..10120
DNA (1431bp) protein (477aa)
Putative ATPase with chaperone activity, associated with Flp pilus assembly Tax=Cystobacter fuscus DSM 2262 RepID=S9QGK8_9DELT
ATPase central domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10120..10797
DNA (678bp) protein (226aa)
Isoprenylcysteine carboxyl methyltransferase family protein bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10804..12003)
DNA (1200bp) protein (400aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Phaeophyceae tax=bin5_DeltaP organism_group=Deltaproteobacteria
TPR repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1066_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12039..12335)
DNA (297bp) protein (99aa)
hypothetical protein bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12332..12736)
DNA (405bp) protein (135aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13) bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1066_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12867..13166
DNA (300bp) protein (100aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histone-like DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1066_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13192..14415)
DNA (1224bp) protein (408aa)
Multi-sensor signal transduction histidine kinase Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U7W2_GEOTM
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 14 items

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