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PLM3-1_170_b1_sep16_scaffold_1129

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1129_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(19..1689)
DNA (1671bp) protein (557aa)
Pyrrolo-quinoline quinone Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U7F6_ADVKW
pyrrolo-quinoline quinone
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1129_2
unknown

Not on your lists

1743..1910
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1129_3
unknown

Not on your lists

2003..2893
DNA (891bp) protein (297aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1129_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2763..5885)
DNA (3123bp) protein (1041aa)
CzcA family heavy metal efflux protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1W8_CORCM
helA; CzcA family heavy metal efflux protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1129_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5888..7120)
DNA (1233bp) protein (411aa)
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family Tax=Cystobacter fuscus DSM 2262 RepID=S9P673_9DELT
RND family heavy metal efflux transporter MFP subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1129_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7136..8353)
DNA (1218bp) protein (406aa)
Putative cobalt-zinc-cadmium resistance protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DDM7_MYXXD
cobalt-zinc-cadmium resistance protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1129_7
unknown

Not on your lists

8590..8736
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1129_8
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8736..9431
DNA (696bp) protein (232aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00036BE290
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEE51685.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3-1_170_b1_sep16_scaffold_1129_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9829..10311)
DNA (483bp) protein (161aa)
hypothetical protein Tax=Sphingobium sp. YL23 RepID=UPI00039A6254
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1129_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10308..11015)
DNA (708bp) protein (236aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1129_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11054..11539)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7T7_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1129_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11603..12997)
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1129_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13184..13582)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1129_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13572..13901)
DNA (330bp) protein (110aa)
nitrogen regulatory protein P-II bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1129_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13901..17002)
DNA (3102bp) protein (1034aa)
Heavy metal efflux pump, CzcA family Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHS6_ANADF
CzcA family heavy metal efflux protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1129_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17013..18560)
DNA (1548bp) protein (516aa)
RND family efflux transporter MFP subunit bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1129_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(18560..19816)
DNA (1257bp) protein (419aa)
efflux transporter, outer membrane factor (OMF) family bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Outer membrane efflux protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1129_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20390..20728)
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV99_9BACT bin=RBG2 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG2 organism_group=Chloroflexi
growth inhibitor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1129_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20715..20996)
DNA (282bp) protein (94aa)
id=4206259 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b1_sep16_scaffold_1129_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(21066..22325)
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RUM1_9BRAD
signal peptide
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_1129_21
Mycobacterium yongonense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22510..23973
DNA (1464bp) protein (488aa)
Uncharacterized protein Tax=Mycobacterium yongonense 05-1390 RepID=M1FV02_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV14920.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium yongonense 05-1390.;"
PLM3-1_170_b1_sep16_scaffold_1129_22
Leishmania mexicana, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

23927..27190
DNA (3264bp) protein (1088aa)
Membrane associated protein-like protein Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) RepID=E9B308_LEIMU
Membrane associated protein-like protein {ECO:0000313|EMBL:CBZ29622.1}; species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania mexicana (strain MHOM/GT/2001/U1103).;"
response regulator receiver
PLM3-1_170_b1_sep16_scaffold_1129_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(27850..28245)
DNA (396bp) protein (132aa)
Ribonuclease VapC Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXS9_GRAMM
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1129_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(28248..28451)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXS8_GRAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1129_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28643..29290)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000363F52D
Uncharacterized protein {ECO:0000313|EMBL:KCZ70435.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative membrane protein
PLM3-1_170_b1_sep16_scaffold_1129_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(29448..30476)
DNA (1029bp) protein (343aa)
ATPase Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003619877
copper-translocating P-type ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 26 items

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